Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00220 ATGGCTCCAAATCTGAGGCTAAGATTATGTTATCCCGTGTTCTTTTTGTTGCTGGGTTTTCTCTTGAATTCAAATGGCGAATTGGATCATCAAGTTTCACATAAGGTCATAGCTGCTCCTCGTAAAGATGTAGGAACTAATGTAATTGATGGCACTGGTGTAGAGAATGCTTTTAATTTTGAGAATGGCAATAGTGCGGTGGGTAGTAGGAAAGGTGCAGGTAATAAGGTTTCAGTTTCAACTGTTGCGTTGTTTACCCTTGCGATGGCAGCTGCGACTGGTTTAGGTGCTGTGCCCTTCTTCTTTGTGGAGCTTGATCCGCAGTGGGCTGGATTGTGCAATGGAATGGCTGCAGGTGTCATGTTGGCTGCGAGCTTTGATCTAATACAAGAAGGGCAGGAGTATGGTGCTGGAAATTGGGTTGTCACTGGGATTCTAGCTGGTGGAATCTTTATCTGGCTATGTAAGAAGTTTCTTGAGCAATATGGGGAAGTAAGTATGTTGGATTTAAAAGGTGCTGACGCTGCCAAAGTTGTTCTTGTTATTGGAATAATGACTCTCCATTCTTTTGGGGAGGGATCTGGGGTTGGAGTCTCATTTGCTGGCTCAAAGGGTTTTACTCAAGGCCTGTTGGTAACTTTGGCTATTGCGGTACACAACATTCCCGAAGGATTAGCTGTGAGCATGGTGCTTGCATCAAGGGGTGTCTCTCCACAGAATGCTATGTTATGGAGCATAATTACATCTTTACCCCAGCCCATTGTAGCAGTTCCTTCATTTATTTGTGCTGATGCATTCAGTAAGTTTCTTCCTTTTTGTACGGGATTTGCTGCTGGATGTATGATTTGGATGGTTATTGCAGAAGTGCTTCCTGACGCTTTCAAGGAAGCCTCAGCTTCACAGGTTGCATCATCTGCAACCCTTTCTGTAGCATTTATGGAAGCTCTCAGCACCTTCTTTCAGAATTTCAGCCATGACTACAACGCTGAGGATGCTTCTGGCTTTTTTGTTTCATTACTTTTTGGTCTTGGCCCTTTACTTGGAGGAATCATTCTTGTTGTATTTGCTCTTGCATTGCGTCTTCAGCATGCTCTCCTCATGGGCACCGCATGTGGTATTGCTTTTGTTCTTGGTGCTTGGCGACCAATACAACTTATTTTGTCTTCAAAGTTGGGATTCATTCCTATTTTGCTACTCCTCGCAATGGGTGCTGCTTTCATCCAGGTTTCTACTTCTGGTGTATTGAAGATGGCAACTACCAAAAAGGCCTCAGTCAATGACTTGCCTACACTTACTGGTTTCCCACTCAGTGTTCACACCCTTCAATCATTCATATCATGTGGTGCAGTAGCCATTCATGCCTTAGCTGAAGGACTTGCATTGGGAGTGGCTGCACCAAAAGCATATGGACTTGGTCGTCACATGGTCCTTCCAGTCTCTCTACACGGGCTTCCTCGAGGTGCAGCTGTGGCCAGCTGCATATTTGGAGTCACCGATAGCTGGCATGGCTCCCTTGCAACAGCTGCCATAATTGGATTTATGGGTCCAATATCAGCAATAGGAGCTATTCTTACTGGTATTGACTACAGTGGCCTTGATCACATAATGGTTATTGCCTGTGGTGGATTAATCCCAAGCTTTGGAAATGTAGTAAAGAGAGCTCTAAGTTGGTTTGCTTACATACACCTTACTGCAATTCTGCACCAGAGGCTGTCAGATAAAGAGTCTTATGCTGCCTTTCCTGCATCATCTGTTGTTACTGTTCTTCTAACAGCTGTATACATTTCTGAAATTCATATCCCAAAACATGGTTGCTCTAATTTGAAGAGACCCTTCATAAAGAAACTAGAAAAAGAAATTTCAAATTTGGAAATTCCCTAA 1881 0.437 MAPNLRLRLCYPVFFLLLGFLLNSNGELDHQVSHKVIAAPRKDVGTNVIDGTGVENAFNFENGNSAVGSRKGAGNKVSVSTVALFTLAMAAATGLGAVPFFFVELDPQWAGLCNGMAAGVMLAASFDLIQEGQEYGAGNWVVTGILAGGIFIWLCKKFLEQYGEVSMLDLKGADAAKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFTQGLLVTLAIAVHNIPEGLAVSMVLASRGVSPQNAMLWSIITSLPQPIVAVPSFICADAFSKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASASQVASSATLSVAFMEALSTFFQNFSHDYNAEDASGFFVSLLFGLGPLLGGIILVVFALALRLQHALLMGTACGIAFVLGAWRPIQLILSSKLGFIPILLLLAMGAAFIQVSTSGVLKMATTKKASVNDLPTLTGFPLSVHTLQSFISCGAVAIHALAEGLALGVAAPKAYGLGRHMVLPVSLHGLPRGAAVASCIFGVTDSWHGSLATAAIIGFMGPISAIGAILTGIDYSGLDHIMVIACGGLIPSFGNVVKRALSWFAYIHLTAILHQRLSDKESYAAFPASSVVTVLLTAVYISEIHIPKHGCSNLKRPFIKKLEKEISNLEIP 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00220 626 Pfam ZIP Zinc transporter 174 300 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vimu6g00220 626 PANTHER ZINC/IRON TRANSPORTER 84 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00220 Vimu-Chr6 2756683 2760704 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00220 - - gmx:100800396 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00220 6 2756683 2760704 Vimu6g00220 6 2756683 2760704 ECH
Vimu6g00220 6 2756683 2760704 Vimu9g01602 9 25319921 25323616 PCT