Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02781 ATGTCGAAGCTTGCAGGATATTCCCTGGCCGTTTCATTTGCTCCCACAGGTTCCAATATCCTTAAAAACAATGGCAGATTCCCACTAGTTATATCTCGTAGGAATAAGTTCAGCCATAGGTTATTTTCTACTCGTGTTCTGAAAGCACAATTACATGATAAGCCTGGGGTGGTTTCCAGATACTATCTTCCTCCTTGGTTTAGTGTTGCTCCAATGATGGAATGGACTGACAATCACTATAGGACTCTAGCACGCCTCATATCAAAACATGCTTGGCTATACACGGAGATGGTTGCAGCCGAAACAATTGTTCATCAAAAGGACAATCTGGTAGATATATAA 342 0.4152 MSKLAGYSLAVSFAPTGSNILKNNGRFPLVISRRNKFSHRLFSTRVLKAQLHDKPGVVSRYYLPPWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMVAAETIVHQKDNLVDI 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02781 113 Pfam Dihydrouridine synthase (Dus) 69 108 IPR035587 -
Vimu5g02781 113 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 60 110 IPR004653 GO:0002943|GO:0017150
Vimu5g02781 113 Gene3D Aldolase class I 63 112 IPR013785 -
Vimu5g02781 113 SUPERFAMILY FMN-linked oxidoreductases 66 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02781 Vimu-Chr5 37320848 37327876 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02781 K05539 - gmx:100808450 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02781 5 37320848 37327876 Vimu5g02781 5 37320848 37327876 ECH
Vimu5g02781 5 37320848 37327876 Vimu4g02071 4 23026037 23028764 PCT