Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02071 ATGGCCATGGTGAAAACAATAGCTAATAGCGAGACTCATGATGGTCTAAAAGTGGAGAAGTTGAGTCCCTACAGTGAAGGTGATGGCACGAGGTTACTGCATGGTTGGACATTGGTGGTGCAAGTGAAGATCATAAGGAGAATTAGGATTTTAGTGGAAGAGGGTGATGACTTAGAAAAATATAGTGATATGACACTTTGTGGGGAAGAATCACTTAGAACAGCTGTGATGGTTGCAAATGGCTATTTTCCTCCTTTGTTCAGTGTGGCCCCAATGATGGACTGGACAGATCATCACTATAGGACTCTTGCACGTCTCTTGTCAAAGCACACTTGGCTCTACACGGAGATGCTTGCTGCTGAAACAATTGTTTATCAAAAGGGAAATCTGGACAGATTCTTGGCATATTCTCCAGATCAACACCCTATTGTGCTTCAAATTGGTGGAAGTAATTTAGATAATTTGGCAAAAGCAACTGAACTGGCAAATGCGTATTGCTATGATGAGATCAACTTCAACCCTAGAGTAGCTGGACGTGGATGCTTTGGTGCACGTCTTATGCTTGATCCAAAGGCTATTTCATTGATTTTTGCCAATACAAATGTACCTGTTACTGTTAAATGTCGAATTGGTGTGGATGATCATGATTCCTACAATGAATTGTGTAAGGGGAAGCTTGCAGGATTTAAAGATCGTGGCACACCACACGCTTGGCCATAG 720 0.4208 MAMVKTIANSETHDGLKVEKLSPYSEGDGTRLLHGWTLVVQVKIIRRIRILVEEGDDLEKYSDMTLCGEESLRTAVMVANGYFPPLFSVAPMMDWTDHHYRTLARLLSKHTWLYTEMLAAETIVYQKGNLDRFLAYSPDQHPIVLQIGGSNLDNLAKATELANAYCYDEINFNPRVAGRGCFGARLMLDPKAISLIFANTNVPVTVKCRIGVDDHDSYNELCKGKLAGFKDRGTPHAWP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02071 239 Gene3D Aldolase class I 83 227 IPR013785 -
Vimu4g02071 239 SUPERFAMILY FMN-linked oxidoreductases 87 219 - -
Vimu4g02071 239 CDD DUS_like_FMN 87 223 IPR035587 -
Vimu4g02071 239 Pfam Dihydrouridine synthase (Dus) 89 221 IPR035587 -
Vimu4g02071 239 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 80 223 IPR004653 GO:0002943|GO:0017150
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02071 Vimu-Chr4 23026037 23028764 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02071 K05539 - gmx:100785422 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02781 5 37320848 37327876 Vimu4g02071 4 23026037 23028764 PCT