Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02758 ATGGTGAGAATGTCAGTGACATTCATATTCACACTTTCTGTTGCCATACTATGTGCTGCTTCAGCCTTTGCAGCAGTTCAACACAGGTCACCAGAAGTTTACTTGCAGAATGGTAACTTTGAGGAGAAACCAGACCCCAGATACCTCAAGAAAAGTAGACTCATTGGGAAATATGCTCTTCCAAAATGGGAGATCAATGGTCATGTTGAGTATGTGTCAGGAGGGCCACAACCTGGAGGCATGTACTTCCCAGTTAGTGATGGAGTGCATGCTGTGAGGCTTGGAAATGAGGCTTCAATCTCACAAACTGTGAAGGTTAAGCCTGGGAAATGGTATGCTCTAATTGTAGGAGCCTCAAGGACTTGTGCTCAAGATGAGATGTTAAGGATCTCAGTGCCTCCACACTCTGGAGATGTTCCTTTGCAGACCCTTTATAGCCTCAATGGTGATGTTATTGCTTGGGGATTCAGGGCCATTTCTTCTGTTGCAAAAGTGATTTTCCATAACCCTGGAATTCAAGAAGATCCTTCATGTGGTCCACTGTTGGATGCTGTTGCTATTGCTCAATTACATACAATTTGGTCTCTTGCAGATAATTTGGTTAAAAATGGTGGCTTTGAGGAGGGTCCATTTCCTATTTTCAACACTTCAAACGGTGTTCTGCTACCTCCCAAACAAGAAGATATTGTGTCTCCACTACCTGGTTGGATGGTTGAATCCATCAAAGCCGTGAAGTTCATAGATTCAAAGCATTTCAGTGTCCCACTTGGACATGGAGCAATAGAGCTTATTGCAGGCAGGGAAAGTGTCATTGCCCAAATTCTCAGAACAGTTCCCAACAAAGTCTACAACATGAAGTTCACAATTGGAGACGCCAAAAATGCTTGTCATGGATCGATGATGGTTGAAGCATTTGCAGCAAAAGATACCCTCAAAGTTCCCTTCAAATCGGAAGGGAAAGGAAAATTCAAGACTGTGAGCTTCAAGTTCAGAGCAATTGAAAACAGAACCAGAATAACATTCTACAGCTCTTTCTACCATACAAGAATTCACGACTATGGATCTCTTTGTGGCCCTGTTATTGATCAAGTTATAGTGTCTCCTGTTGCCTAA 1113 0.4277 MVRMSVTFIFTLSVAILCAASAFAAVQHRSPEVYLQNGNFEEKPDPRYLKKSRLIGKYALPKWEINGHVEYVSGGPQPGGMYFPVSDGVHAVRLGNEASISQTVKVKPGKWYALIVGASRTCAQDEMLRISVPPHSGDVPLQTLYSLNGDVIAWGFRAISSVAKVIFHNPGIQEDPSCGPLLDAVAIAQLHTIWSLADNLVKNGGFEEGPFPIFNTSNGVLLPPKQEDIVSPLPGWMVESIKAVKFIDSKHFSVPLGHGAIELIAGRESVIAQILRTVPNKVYNMKFTIGDAKNACHGSMMVEAFAAKDTLKVPFKSEGKGKFKTVSFKFRAIENRTRITFYSSFYHTRIHDYGSLCGPVIDQVIVSPVA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02758 370 FunFam DUF642 family protein 195 366 - -
Vimu5g02758 370 PANTHER OS02G0527500 PROTEIN-RELATED 16 367 - -
Vimu5g02758 370 Gene3D - 195 350 - -
Vimu5g02758 370 Pfam Protein of unknown function (DUF642) 34 187 IPR006946 -
Vimu5g02758 370 Pfam Protein of unknown function (DUF642) 199 366 IPR006946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02758 Vimu-Chr5 37173783 37175475 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02758 - - gmx:100812299 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g02077 4 23059996 23062668 Vimu5g02758 5 37173783 37175475 ECH
Vimu5g02758 5 37173783 37175475 Vimu5g02758 5 37173783 37175475 ECH