Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02077 ATGGCTTACCTTCAAAATGGCAACTTTGAGGAGCAGCCGAATCCCAAATATCTCAAGAAAACAAAGCTCGTTGGGAAATTTGCTTTGCCCAAATGGGAGATCAATGGTCTGGTTGAGTATGTCTCTGGGGGACCCCAACCTGGTGGCATGTTCTTCCCAGTTACTCATGGAATTCATGCTGTGAGACTTGGCAATGAGGCTTCAATCTCCCAAACTATCAAGGTCAAACAGGGTCAACTGTATGCTCTAATTCTTGGGGCCTCAAGGACTTGTGCACAAGATGAAGTTTTGAGAATCTCTGTGCCTCCACAGACTGGTGATGTTCCTTTGCAGACCCTGTATAGCCTCAACGGTGATGTTATTGCTTGGGGGTTTAAGGCCACTTCTAATGTTGTCAAAGTGACTTTCCACAACCCTGGAGTTCAAGAAGATCCAGCTTGTGGGCCACTTCTGGATGCCATTGCTATCAGGGAGTTCTACCCTCCAATGCCTACTAGAGGTAATGAAACATAG 513 0.4639 MAYLQNGNFEEQPNPKYLKKTKLVGKFALPKWEINGLVEYVSGGPQPGGMFFPVTHGIHAVRLGNEASISQTIKVKQGQLYALILGASRTCAQDEVLRISVPPQTGDVPLQTLYSLNGDVIAWGFKATSNVVKVTFHNPGVQEDPACGPLLDAIAIREFYPPMPTRGNET 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02077 170 Pfam Protein of unknown function (DUF642) 3 157 IPR006946 -
Vimu4g02077 170 PANTHER OS02G0527500 PROTEIN-RELATED 3 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02077 Vimu-Chr4 23059996 23062668 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02077 - - gmx:100804119 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g02077 4 23059996 23062668 Vimu5g02758 5 37173783 37175475 ECH
Vimu4g02077 4 23059996 23062668 Vimu4g02077 4 23059996 23062668 ECH