Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02258 ATGTTATTAGTTTTGAAGCATCATACCTGTGTTAGTAAAAATAAAGAAAAATGTGGGAGCAGTATAAATTCCATGAATGTTGGTGAATATAGTTTACTTAAGACTTACACAAATTTACTTCAGAGCATACTGAATCTGTATCCTAGAATGGAAAAGTTGATAGAATGCCAGTTGGTAAAAGATGCACTATCTCAGATCATTCTCAAACACTGCAAGCCTTTGAAGATATTTTCTCGGATGACATGGATAGCAGTGATGTTTCTTGCAGTGTTCATGGTGTTTTTTCTTGTGATATGGACAATAAGGGCTTGCCAAGACCATAGTCGTCATCATCGTTCAGATTGTCCTGTGTAA 354 0.3559 MLLVLKHHTCVSKNKEKCGSSINSMNVGEYSLLKTYTNLLQSILNLYPRMEKLIECQLVKDALSQIILKHCKPLKIFSRMTWIAVMFLAVFMVFFLVIWTIRACQDHSRHHRSDCPV 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02258 117 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 4 112 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02258 Vimu-Chr5 33735686 33736300 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02258 - - pvu:PHAVU_011G052700g 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00384 4 2738715 2742679 Vimu5g02258 5 33735686 33736300 PCT