Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00384 ATGTGGCTATTCGAGCAGAAGCTGTTTGTGTTAGAGAAGATTGAGAAGGAAGATTATATGCACTTTTCATGTGCGATGTGCAGTTTTGCCAATAAAAGTCAAAATGTTCTTTCCTTGTACCCAACTCATTCTGTGTCAAAGGAAAACTTTAAAAGGTTCTTAGCAATTACACCACAGAAAACTGCTACAAGGTTAAAGATGGTCAAAGTTAGCAGCACCAACACGCTGGTATCTGTTATAGTTGTTGTAGCCTTGATTTTCCCAGAAGTAGCATCACAAGCCCTCTCACCAAGTGATTCTGTTGCAGATAATGTGTCAGATACCATTAGACAATCGGATAATACCATTAGAGTGGACCCTTTAGATCATTTCGAAAAATACAGAGGAGGGTTTAACATCACCAACAAGCACTATTGGAGTTCGGTGATCTTCACTGGAGTATATGGATATGCAATTGGGGTGCTCTGCCTTTTGTGTGGAATTGTGTATGGAAGCTTTTTGGCAATAACATTGGTTTGCCAAAGAAATGACAGAAGGGTTAAAAAGGTCCTTCCTTGTAATTACAAGATCTGTGGTCTTTCAATTCCTTTGGCTATATTACTCACTACTTTTGCTATAGTTGCAACTGGGCTAGTTCTTGCTGGGAGTGCAAGATTCCATTCTGAAGCTAAGACTGCTGTTAATATTATAATCAAGACAGCGAACGAGGCATCAGAAACGATTCAAAACACAACAGGAGCTTTAAAAGGCATGGAAAGTAACTTTATGGAAGCCAATGTCACTGCTGAGACATCCGTAAATCTTGACTCCACTACTGAGAAACTTGATGATGCATCTGCAAACATTGAAAAGCAAGCCAGAAAGAATAGGCGCCTTATTAACAAGGGCTTGAAACTAGTTTTTGTAACTACCACAGTGATTATAAGCATGAACTTGGTTGCTGTAATAGCTCTGTCAGTTTCTGGAGTACTGAGGTTACGGCGGGCACTATACATGCTTGTCATATTATGCTGGTTGTTGACAGTGGTATGCTGGCTACTCTTTGGGGTCTTTTTCTTCTTAGAAAAATTTTCTGGTGATGCATGCACAGCTCTTGACAACTTTCAAGAAAATCCCTATAACAACAGCCTAAGCTCACTCCTCCCTTGTGATGAATTGCTCTCGGCAAAATCAGTTCTATCTGATGTTAGTGCGGGGATCTACGACCTTGTTAACAAGGTGAATGCAAACATATCAGCCATGCAGGCATCATCAGATGTGAATCTTGTTCATGTCTGCAACCCTTTCTCAGCTCCACCAAAGTACTTATACCAGCCAGAGAACTGCCCTGCTAACACTATAAGAATAGGAGACATCCCAAAGGCATTGAAACCATTTACTTGTCCGAATGCCATTGATGGAAGCTGTGACAGTTTGTATTATATAACCGGCAGCCAATACACGAGAGTTGAGGCTTACACAAATTCAATTCAGGACGTGCTGAATGTGTATCCTAGTGTGGAACACTTGTTGGAATGCCAACTAGTAAAAGAAGCATTCTCTCAAGTCCTTGTCAACCACTGCAAGCCTTTGAAGAAATATGCTGAGATGGTATGGCTAGGAATGCTGTTTCTTGCAGTGATCATGGTGTTGCTGATTGTGCTGTGGACTGTAAAAACTCGTCATGAGCATCGTTATAATCTTTCAGATGGTTCTGTGGAGCCTCATTTTGCACCAACCAAAGCCTTGGAATCAGGAACAATTAAAGAGATTGAGATTTGA 1761 0.4089 MWLFEQKLFVLEKIEKEDYMHFSCAMCSFANKSQNVLSLYPTHSVSKENFKRFLAITPQKTATRLKMVKVSSTNTLVSVIVVVALIFPEVASQALSPSDSVADNVSDTIRQSDNTIRVDPLDHFEKYRGGFNITNKHYWSSVIFTGVYGYAIGVLCLLCGIVYGSFLAITLVCQRNDRRVKKVLPCNYKICGLSIPLAILLTTFAIVATGLVLAGSARFHSEAKTAVNIIIKTANEASETIQNTTGALKGMESNFMEANVTAETSVNLDSTTEKLDDASANIEKQARKNRRLINKGLKLVFVTTTVIISMNLVAVIALSVSGVLRLRRALYMLVILCWLLTVVCWLLFGVFFFLEKFSGDACTALDNFQENPYNNSLSSLLPCDELLSAKSVLSDVSAGIYDLVNKVNANISAMQASSDVNLVHVCNPFSAPPKYLYQPENCPANTIRIGDIPKALKPFTCPNAIDGSCDSLYYITGSQYTRVEAYTNSIQDVLNVYPSVEHLLECQLVKEAFSQVLVNHCKPLKKYAEMVWLGMLFLAVIMVLLIVLWTVKTRHEHRYNLSDGSVEPHFAPTKALESGTIKEIEI 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00384 586 Coils Coil 268 295 - -
Vimu4g00384 586 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 81 569 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00384 Vimu-Chr4 2738715 2742679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00384 - - gmx:100805495 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00384 4 2738715 2742679 Vimu5g02258 5 33735686 33736300 PCT