Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02256 ATGGCGAGTCTTGTTCCTGGGGTGCTTCTCAAACTTATGCAGCACATGAACACAGATGTGAAAGTTGCTGGTGAGCACAGGTCCTCTCTGTTGCAAGTTGTGAGCATTGTTCCAGCTCTTGCCGGGGGTGAGTTGTTCCCAAATCAAGGCTTTTATCTCAAGGTTTCCGATTCCTTGCATGCCACCTATGTCTCTCTCCCTGATGAACATGATGATCTCATCCTCAGTGACAAGATTCAACTGGGGCAGTTTGTTTTTGTGGATCGTTTGGAGGCTGCTTCACCAGTTCCTATTCTTCACGGGGTTAGGCCTATTCCTGGGAGGCACGCTTGTGTTGGAACCCCTGAGGACATTGTTGCAACAACTCACTCTCTTGGGTTCCTTGGTAACGCTAAGGCTAACAAGAACAGTGCTTGTTCTGGTCCCTTGGACTTAGAGAGATCCAAGTCTCCTAGGAAAGTGCTGGGGAACCACCACGTTGGGGAGAAGGAGAAGAAGGAGAAAATAAGATTGCATAATGAAGAGCAGTTAGACAAGAAACCAGCTCTTTTGGCTAAGAGTAAATCTCAGACAACAAAAGCAGTAACAGCCAATACTGTTGATGTGAAGAAGGAATCATTGGCAAGATTGAAGTCATTTAATTCAAGGGCCATTCCTTCTTCTCCCACTAGTTGTTATTCTTTGCCTACTTCCTTTGAGAAATTTGCCAACGGGGTCAAGCATCAAGCAAACATCAAGGGAGTGGACAAGCTAACTGCGAAGGTGGGAGTGCTAGAAATAGGAAAGGGCGTACGTGGAGCTAGTCCAACCGGGAAGAGAATTTCCATGGGAAACCCGATTAGAAATTTGGTTCAAGGAATTGAGCTTGGAGCTAAGGTGCTGCGTAAGAGCTGGGAAGGCAATATGGAAGTCAAGAATAAAGAGACATCAAAATCAAGGGCTGCAAAGTCTGATCCTAAGCCTGAGGTTCGTGGCTCAACTCCTAGGAGAAGTACTTCAAGTGAAAAGTTTTCCTCTAAAGAAGAGAGCAAGCTGACAAAGTCCTCCAAGGAAGAGCACAGGACTCAAACAACTATAAAGAAAGTTGTTGCCAATGGAACTATGGAAGAACAAGAAAAGACAGGCAAGCAAAGAGTGAGTGTTGGAAAGAAATCGTCAGAATTTTCAAACACTGGATTCCCTGGAAACTTGGTGAAAATTTCTCCAAGCAGTAGAAAAGTGACAGATGCAAGTGTTCAATGGGCTTCACTGCCATCATCTATTGCAAAGCTTGGCAGGGCATGCCTTGCAAGTGTGGTATTTATTCTCCAACTTTCAATTAAGAGCATTTCAGGAGGGCATTGCCAATGGGACAAAGTCAACCTGGAAGTGATGAAGCACAGAGATGCAGCACAGATGGCAGCAACTGAGGCTATTCAAGAGGCTGCTGCTGCTGAGAGTTTGCTGCAATGTCTAAGTGTATATGCAGAGCTCAATAATTCTGCAAAGGAACAAAACCAGCAGCGAACAATAGAGCAGTTCCTAACTCTTCACGGTAGCCTAAATAGTGCAAGAATGGTTGCTGACTCGTTATATAAATCTATTCCAGATGATTCTTGTCTAGACAGTGAAAGAATCATATCAGAAGAAGAACTAAAACTCAAATCAGACAGACAAAAGCTAGCAAATTATTGGGTCCAGGCTGCTTTATCCACCAATCTATCACCATTTTCTGTTTACAACCGAGAACCTCTATCATCCAGGCTTCCAGCTTCAACCAATTCTCAAAACCAAAAGAATATGATGGGAAGCAAACCAATGCTGGTCATAGAAAATTCAAGTGAAGATACTTCATCAAAATCTCATGGAAAAAACCGTGGGGCTAATTCCAAACACGCCTTGCAAGGAACTCCTCGCAAAGCAGGTGATGCCTTATCAAATGGACACAAACAACTAGTCCAATCACCACGGGATTGGGTCAGAGGAAATGGGTTTGATGAAGTGGTTGATTTAATTGACATGCTGCAAGTGAAGTCAAGAGATTGGTTTCTGGTGTTTGTTGAGAGATTCTTGGACTCTGATGGGGACACTGCTAGCTTGTCAAATAATGGCCAAATAGCAGGTATGCTCACTCAGCTAAAAAGTGTGAATGATTGGCTTGATGAGATAGGATCAAGCAAGAATGAAGGAGAATCATGGCAGATACCAGCAGAGACAATTGACAGGTTGAGGAAGAAGATATATGAATATCTTCTTACACATGTTGAATCTGCAGCAGCAGCACTCACTGGTGGATCACAATCATGCCCTGGAATCCAAACTTCAGATATCAAAGCCAAAAAGTGA 2325 0.437 MASLVPGVLLKLMQHMNTDVKVAGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSLHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEAASPVPILHGVRPIPGRHACVGTPEDIVATTHSLGFLGNAKANKNSACSGPLDLERSKSPRKVLGNHHVGEKEKKEKIRLHNEEQLDKKPALLAKSKSQTTKAVTANTVDVKKESLARLKSFNSRAIPSSPTSCYSLPTSFEKFANGVKHQANIKGVDKLTAKVGVLEIGKGVRGASPTGKRISMGNPIRNLVQGIELGAKVLRKSWEGNMEVKNKETSKSRAAKSDPKPEVRGSTPRRSTSSEKFSSKEESKLTKSSKEEHRTQTTIKKVVANGTMEEQEKTGKQRVSVGKKSSEFSNTGFPGNLVKISPSSRKVTDASVQWASLPSSIAKLGRACLASVVFILQLSIKSISGGHCQWDKVNLEVMKHRDAAQMAATEAIQEAAAAESLLQCLSVYAELNNSAKEQNQQRTIEQFLTLHGSLNSARMVADSLYKSIPDDSCLDSERIISEEELKLKSDRQKLANYWVQAALSTNLSPFSVYNREPLSSRLPASTNSQNQKNMMGSKPMLVIENSSEDTSSKSHGKNRGANSKHALQGTPRKAGDALSNGHKQLVQSPRDWVRGNGFDEVVDLIDMLQVKSRDWFLVFVERFLDSDGDTASLSNNGQIAGMLTQLKSVNDWLDEIGSSKNEGESWQIPAETIDRLRKKIYEYLLTHVESAAAALTGGSQSCPGIQTSDIKAKK 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02256 774 PANTHER EXPRESSED PROTEIN 1 755 IPR010341 -
Vimu5g02256 774 Pfam Plant protein of unknown function (DUF936) 456 755 IPR010341 -
Vimu5g02256 774 Pfam Plant protein of unknown function (DUF936) 4 428 IPR010341 -
Vimu5g02256 774 MobiDBLite consensus disorder prediction 302 325 - -
Vimu5g02256 774 MobiDBLite consensus disorder prediction 605 640 - -
Vimu5g02256 774 MobiDBLite consensus disorder prediction 334 358 - -
Vimu5g02256 774 MobiDBLite consensus disorder prediction 302 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02256 Vimu-Chr5 33720892 33724839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02256 - - gmx:100775984 1181.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00388 4 2772904 2774856 Vimu5g02256 5 33720892 33724839 PCT