Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00388 ATGCGACTAACATATTCAGAGCTAACGAATTCTGCTAAGGAACATAACCCACAGCCAGCAGTTGAGCAATTTTTAAATCTTCATGCTAGCTTGAATAGTACCCGGACAATAGCTGAATCCTTAACAAAACACATCCCAGATTGTTCATCTCCAGATTATGACAAGGGTACAGCAGAAGACATACTAAAAGTAAAATCAGATAGACAAAAACAAGCGGCTTCCTGGGTCCAGGCAGCCTTGACCACCAATCTGTCATCCTTTGCTGTTTTTACAAGAGAAACTCAAACATCGAGGCCTCCAGCTTCAAGCAGCTCTCAAAACCAAAAGTCCGTTGTGGGAAATCAACCCATGTTAGTTCTACACAATTCAAGTGAAGATGCTTCATCAAAAGTTCATGCAAAGACCCGTCTGACATCTAATTCTAAGCATGCCTCACAAGGAACTCTACGCAAACCAGGTGATGGATTATTAAATGGGCAGAAGCAGCTAGTCCAACCACAACCATCCCCTGAATGGGTTAGAGGAAATGGCCTCAATGAAGTGGTTAATTTGGTCGAAACTTTGCAGTTACAATCCCGGGACTGGTTTTTGGGTTTTGTTGAGAGGTTCTTAGACAGTGATGGGGACACTACCTTGTCAGGTAATGACCAAATAGCAGGTATGCTCACTCAATTGAAGAGTGTTAATGACTGGTTAGATGAAATTGTTTCAAGCAAGGATGAGGGAGAATCATGCCAAATATCAGCAGAGACAATTGACCGGTTGAGGAAGAAAATATATGAATATCTTCTTACACATGTTGAATCTGCTGCTGCTGCACTCAGTGGTGGATCACAATCGTCACCTCAGATCCAAACAACAACACAGATTAAAGCCAAAAGGTGA 885 0.4215 MRLTYSELTNSAKEHNPQPAVEQFLNLHASLNSTRTIAESLTKHIPDCSSPDYDKGTAEDILKVKSDRQKQAASWVQAALTTNLSSFAVFTRETQTSRPPASSSSQNQKSVVGNQPMLVLHNSSEDASSKVHAKTRLTSNSKHASQGTLRKPGDGLLNGQKQLVQPQPSPEWVRGNGLNEVVNLVETLQLQSRDWFLGFVERFLDSDGDTTLSGNDQIAGMLTQLKSVNDWLDEIVSSKDEGESCQISAETIDRLRKKIYEYLLTHVESAAAALSGGSQSSPQIQTTTQIKAKR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00388 294 Pfam Plant protein of unknown function (DUF936) 4 274 IPR010341 -
Vimu4g00388 294 MobiDBLite consensus disorder prediction 133 147 - -
Vimu4g00388 294 MobiDBLite consensus disorder prediction 124 171 - -
Vimu4g00388 294 MobiDBLite consensus disorder prediction 274 294 - -
Vimu4g00388 294 PANTHER EXPRESSED PROTEIN 4 275 IPR010341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00388 Vimu-Chr4 2772904 2774856 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00388 - - pvu:PHAVU_005G154300g 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00388 4 2772904 2774856 Vimu4g00388 4 2772904 2774856 ECH
Vimu4g00388 4 2772904 2774856 Vimu5g02256 5 33720892 33724839 PCT