Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02235 ATGGGAGTTATGTCCAGGCGGGTTGTGCCCGTCTGTGGCAACCTATGTTGCGTCTGTCCTTCTCTGCGGGCGAGCTCTAGACAACCGGTGAAACGATACAAGAAGTTGCTAGCCGATATTTTCCCACGCAATCAGGAGGCTGAACTTAATGACAGAAAAATTGGAAAACTATGTGACTATGCTTCCAAGAACCCACTGAGAATTCCCAAGATTACTGATTACTTGGAGCAACTATGTTACAAGGATTTGCGTTATGAAACCTTTGGCTCAGTGAAAGTTGTCTTGTTCATATACAAGAAATTCTTATCGTCGTGTAAGGAACAGATGCCTCTTTTTGCTGGTAGTTTGTTAGAGATTATTCGAACTCTTCTAGAACAAACCCGAACAGATGAAATCAGGATCTTAGGCTGCAACGTTCTTTTTGATTTTCTAGATTGCCAGACAGATGGTACATACATGTTCAACTTAGAGGGTTTTATTCCTAAGCTATGTCAATTGGCTCAAGAAGTGGGGGAAGATGAACGAGCTTTGCGTCTACGTTCAGCTGGACTACAAGCTCTATCCTATATGGTGCGTTTCATGGGTGAGCACTCACATCTTTCCATGGTTTCAGATGAAATTATATCAGTGACTTTGGAGAATTACACGAGTCTCCAATCTAACTCCAAATCTTCCATGGAAGATAAGATGAATTCTGAGTCACTGGACCCTATAGTACAGGGATTTCCTAAAGTAGAAGACCCTTTAACAGATATCACTAAGAAGGATCCTTTGTTGCTGAAAGCTGTGACCGGAAATGAGATGAACATTGTGTTGGATACTGCTAAAGATCCTACATACTGGTCAAAGGTCTGCTTGTATAATATGGTCAAATTAGCAAGAGAAGCTACAACTTTACGGCGTGTTCTTGAACCTCTTTTTCATTATTTCGATTCTGAAAATCAATGGTCTTCTGAAAAAGGAGTTGCTGCTCATGTTTTGATTTACTTACAATCTCTTTTAGCAGAATCAGGAGATAATTCCTGCCTTCTGTTGTCCGTTTTGGTCAAGCACTTGGATCATAAAAATGTTGCTAAGCAGCCAATCCTTCAGATTAATATTATTAACACAACAACAAAACTTGCACAAAATGTGAAGCAACAGGCTTCGGTTGCAATACTTGGTGCAATATCTGAACTAATTAAACATTTAAGGAAGACTCTGCAAAATTCAGCCGAAGCTTCCAGCTTAGGAAATAACGGGTTTAAGTTGAATACTGAACTTCAATTTGCCTTGGAAATGTGTATATTGCATCTTTCCAACAAGGTTGGGGATGTAGGACCCATTCTTGATTTGATGGCTGTGGTATTAGAGAATATCTCAACTACAACTACCATTGCAAGAACGACAATTTCTGCTGTTTATCAAACTGCAAAGCTAATCACGTCCATCCCTAATGCTTTCCCTGATGCTTTGTTTCATCAATTGCTCCTGGCCATGGCTCACTCTGATCATGAAACCCGAGTTGGAGCTCATCGCATCTTTTCTGTAGTGCTTATTCCATCACCATTTTCTCCTCAGTTAGACCAAATAACAAAGATGTCCGAGAAGGTATCAAGCGAAAGCTTCTCCATTCAGCATGAAAATCTTTTAGGAGCAGAGTATATGAATGGGAAACAAGCGGAAGGAAAGGCAGTAGTTGGTGTGAATGAGAAATACGCAATTCGTCCATACCATGCTCACATCTTTCCTGGGGCTCTAATGGATGGAAAAAATGAGCTAAGCTCTTTTCGATTAAGCAGTCACCAAGTGAGTCTCTTGCTTTCTTCAATCTGGATTCAGGCAACCTCTATGGATGGTGGCCCTGCAAATTTTGAGGCAATGGCTCACACTTATAGCATTGCTTTATTGTTCACTCGTTCAAAGACATCCAGTTACATGGCTTTAGTAAGATGTTTCCAACTGGCATTTTCCCTAATGAGCCTCTCTTTGGATCAAGAAGGAGGTTTGCAACCATCTCGCAGGAGGTCTCTTTTCACTTTAGCATCATACATGCTTATATTCTCAGCCAGGGCAGGGAATTTCCCCGAGCTAATTCCAAAAGTTAAAGCATCCTTGACAAATTTAACTGTAGATCCTTTCCTTGAGTTGGTCGATGATGTCAAGCTGTGTGCTGTTTATACAGAATCAGAGAAGATAGTTTATGGATCTCAGGAAGATGATGTTTCAGCTATGAAGACACTGTCAGCAATTAAATTGGATGATAAGGAATTGAAAGAGACTGTAATATCATTCTTCCTGACTAAATTTTCAGAATTATCAGAGGATGAGTTGTCGACCATAAAAAAACAACTTGTACAAGGGTTTTCCCCTGATGATGCCTATCCATTGGGACCTCCTTTGTTTATGGAGACACCAGTGCAGTGTTCTCCACTTGCTGAGATTGAGTTCCCAGATTTTGATGAGATTATGGCTCCAGCAGCTTTGATGGATGAAGAGGCCCGGCCTGAACCTAGTGGAAGTCAGTCAGATCGTAAATCATCACTATCTAGCAATAACCCAGACATTCTAAGTGTTAATGAACTCTTACAATCGGTATTGGAAACTGCACGGCAGGTGGCTAGTTTTCCCATTTCATCAACTCCTGTGCCTTATGACCAGATGAAGAACCAGTGTGAGGCACTTGTAACAGGAAAACAAAAGAAGATGTCAGTTCTTCACAGTTTCAAGCACCAGCAGGAAACTAGGGCAATAGTTCTTTCAAGTGAAATTGAAATTAAAGTTTCCCCTTTGCCAATTAAGACACTGGATTATTCAGAAGGTGATCTGAAGTTGGTCAGTCAGGAACAATTTCAAGCACAATATCAAGTTCGCCCCTGTTCATTTGATTTTGGACAGCAACATTCTTTAAAGCTACCACCTGCAAGCCCCTTTGATAAATTCTTGAGAGCTGCTGGATGCTAG 2943 0.4084 MGVMSRRVVPVCGNLCCVCPSLRASSRQPVKRYKKLLADIFPRNQEAELNDRKIGKLCDYASKNPLRIPKITDYLEQLCYKDLRYETFGSVKVVLFIYKKFLSSCKEQMPLFAGSLLEIIRTLLEQTRTDEIRILGCNVLFDFLDCQTDGTYMFNLEGFIPKLCQLAQEVGEDERALRLRSAGLQALSYMVRFMGEHSHLSMVSDEIISVTLENYTSLQSNSKSSMEDKMNSESLDPIVQGFPKVEDPLTDITKKDPLLLKAVTGNEMNIVLDTAKDPTYWSKVCLYNMVKLAREATTLRRVLEPLFHYFDSENQWSSEKGVAAHVLIYLQSLLAESGDNSCLLLSVLVKHLDHKNVAKQPILQINIINTTTKLAQNVKQQASVAILGAISELIKHLRKTLQNSAEASSLGNNGFKLNTELQFALEMCILHLSNKVGDVGPILDLMAVVLENISTTTTIARTTISAVYQTAKLITSIPNAFPDALFHQLLLAMAHSDHETRVGAHRIFSVVLIPSPFSPQLDQITKMSEKVSSESFSIQHENLLGAEYMNGKQAEGKAVVGVNEKYAIRPYHAHIFPGALMDGKNELSSFRLSSHQVSLLLSSIWIQATSMDGGPANFEAMAHTYSIALLFTRSKTSSYMALVRCFQLAFSLMSLSLDQEGGLQPSRRRSLFTLASYMLIFSARAGNFPELIPKVKASLTNLTVDPFLELVDDVKLCAVYTESEKIVYGSQEDDVSAMKTLSAIKLDDKELKETVISFFLTKFSELSEDELSTIKKQLVQGFSPDDAYPLGPPLFMETPVQCSPLAEIEFPDFDEIMAPAALMDEEARPEPSGSQSDRKSSLSSNNPDILSVNELLQSVLETARQVASFPISSTPVPYDQMKNQCEALVTGKQKKMSVLHSFKHQQETRAIVLSSEIEIKVSPLPIKTLDYSEGDLKLVSQEQFQAQYQVRPCSFDFGQQHSLKLPPASPFDKFLRAAGC 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02235 980 PANTHER PUTATIVE, EXPRESSED-RELATED 1 980 - -
Vimu5g02235 980 MobiDBLite consensus disorder prediction 826 846 - -
Vimu5g02235 980 SUPERFAMILY ARM repeat 61 782 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02235 Vimu-Chr5 33580959 33589487 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02235 K21842 - gmx:100817330 1697.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00405 4 2886803 2895852 Vimu5g02235 5 33580959 33589487 PCT