Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00405 ATGTCCAGGCGGGTCGTGCCCGTCTGTGGTAACCTCTGTGTGTTTTGTCCTTCTCTGCGTGCAAGATCAAGGCAACCGGTGAAACGTTACAAGAAGTTGATGGCTGATATATTCCCGCGTAATCAGAAGCCCTTCTTAGCCCTATTCCGATACTTATCAGGTGATGATTACTGTGATTTTCAGGTTGCTGAGCCTAACGACAGGAAAATTGGAAAGCTATGTGAGTATGCTTCTAGGAATCCAATGAGAATTCCTAAGATTACTGACAACTTGGAGCAAAGATGTTATAAGGATTTGCGTCATGAAAACTTTGGTTCGGTGAAAGTGGTCTTGTGCATATATAGGAAACTGTTATCGACATGTAAGGAGCAGATGCCGCTGTTTGCCAATAGCTTATTAGGGATCCTTCGAACGCTTCTAGAGCAAACTCGTTCAGAGGAAATGCGGATCTTAGGCTGCAAGACTCTTGTAGAATTTACAGATTGCCAGACAAATGGTACATACATGTTCAACTTAGAGGGTTTTATACCAAAACTATGTCAATTGGCTCAAGAAGTGGGAGATAATGAACAAGCTCTTCTTCTACGATCAGCTGGCCTACAAGCGCTCTCCTACATGGTGCAGTTCATGGGAGAGCACTCACATCTTTCCATGGATTTTGACCAAGTGAGTATTATTTCCCTACTCTTCTTATTCGTTGATTCTGTCAGAGACATTAAGCAAAGGGTTGTTAAACATATTATATCAGTGATTTTGGAAAATTTCACGGATCTCCAATCCAAATCCAATCTTGCCAAAGTAGAGAAATTGAATTCACAATCTCAGAGCCAATTGGTCCAACAATTTCCCAAAGGAGGAGACCTACATTCTTTATCAGATATCAGTAAGAAGAATGCTTCCTTACTTAATGGTGTGACAGGAACTGAGACAGAACCCAAGTTAGATACTGGTAAAGATCCTGCTTATTGGTCAAAGATTTGCTTGTATAATATGGCCAAATTGGCCAAGGAAGCTACAACTGTGCGGCGTGTCCTTGAACCATTTTTTCATAACTTTGATGCTGAAAACTACTGGTCTTCTGAAAAGGGAGTTGCTTCTTGTATTTTGCAGTATTTGCAATCTCTTCTAGCAGAATCAGGTGATAACTCCCATCTTCTGTTGTCCATTTTGGTCAAGCACTTGGATCATAAAAATGTTGCTAAGCAGCATATCCTTCAGATTGATATTATTAAAACCACCACGCAGCTTGCACAAAATGTGAAGCAGCAGGCTTCGGTTGCAATCATTGGTGCAATATCTGATCTCGTTAAACATTTAAGGAGATGCCTGCAAAATTTAGCTGAAGCATCCAGCATTGGAGATGCTACATATAGGTTGAATACTGAACTTCAGTCCGTCTTAGAAATGTGTATATTACAACTTTCAAAGAAGGTTGGGGATATAGGACCAATTCTTGATTTGATGGCTGTGGCACTGGAGAATATCCCAGTTACTACCATTACAGCAAGATCGACAATCTCTGCTGTCTATCAAACAGCAAAATTAGTCACTTCCATTCCAAACGTGTCATATCACAATAAGGCTTTCCCTGATGCCTTGTTTCATCAATTGCTCCTAGTCATGGTTCATCCTGACTACGAAACACAAATTGGAGCACACAAGATCTTCTCTTTGGTGCTTACGCCATCCATGGTGTCTCCTTGGTTGGACCACAAAACAATTACTGCTCATAAGGCACAGAATGATTGCTTCTGCAATCCGCCTGAAACTTTTTCTGGAGATGAAAACTGGAACGGAAAACTTGAAGAAGAAAAGACAATATCTGGTGTCAAAGGGAAGAAATATGCAATTCATCCATATAGGGGCTACAGCTTTTCTCCCAAGCTAATTGATGGAAACGAGGATCAAAGTGCTCTTAGGCTAAGCAGTCATCAAGTCAGTCTTCTGCTTTCTTCAATCTGGGTCCAGGCAACATCTGTGGGAAATGGCCCTTCAAATTATGAGGCAATGGCACACGCCTATAGCATTGCTTTATTATTTATTTGTTCTAAGGTATCCAGTCACATGGGTTTAGCAAGATCTTTTCAACTGGCATTTTCCCTCAGGAGGGTCGCTTTGGACCAACAAGGTGAGATTTACAGACAAATTTTCACTCTAGAGACATTGAGAAATCTTGTCCCTATGGAATCAAGGCTTGAGAAGGCTGGCAGTCTCCGTGATCTAATTCCAATAGTTAAAGCTTCTCTGACCAAGGAAACAGTAGATCCTTTTCTTGAATTGGTTGATGATATCCGACTGCTGGCTGTCTGTAAGGAAACGGGGAAGATAACTTATGGATCTGAGGAAGATGAGGCGGCTGCTGTGAAGTCTCTTTCAGCTGTAGAATTGGATGACAAGCAGTTGAAAGAGACCGTAATATCGTACTTTATGACTAAATTTTCAAAATTGTCTGAGGATGAACTGTCTAGCATAAAGAATCAACTTGTACAGGGATTTTCCCCCGATGATACATATCCATTAGGACCTCTGTCATTTATGGAGACATCAAGACCATGTTCTCCTCTTCCTCTGATTGAACTCCCAAGTTTTGACGAGATAATGATTCCGGATGATTTGACGGAGGTAGAGACTGGACCTGAGCATAGTGGAAGCCAGTCAGATCGCAAAACATCACAGTCAACCAACCACCCTGATGTTCTAAGTGTTAATCAACTATTAGATTCGGTTTTGGAAACTGCACGGCAAGTTGCAAGTTTCTCCACTCCCTCAACTCCTCTACCTTATGACCAAATGAAGGACCAGTGCGAGGCACTTGAAGCAGGGAAACAACAGAAGATGTCCGTCATTCAGAGTTTCAAGCATCAACAAGAAAGTAATGCCATAATTCTTTCGAGTGAAAATGAAGTTACAGTTGCCCCTCTACATGCTAAGGCACTGGAATATTCAAAAAGTGATTTGAAGTTAGTAACTCAAGAAACATTTAAAGCACAGGATCAAGGACGCAACCATTATCATGACTATGGGCTGCAGCATTCTTTGAAGCTACCTCCTTCGAGCCCCTATGATAAATTCTTGAGAGCTGCGGGATGCTAA 3093 0.4148 MSRRVVPVCGNLCVFCPSLRARSRQPVKRYKKLMADIFPRNQKPFLALFRYLSGDDYCDFQVAEPNDRKIGKLCEYASRNPMRIPKITDNLEQRCYKDLRHENFGSVKVVLCIYRKLLSTCKEQMPLFANSLLGILRTLLEQTRSEEMRILGCKTLVEFTDCQTNGTYMFNLEGFIPKLCQLAQEVGDNEQALLLRSAGLQALSYMVQFMGEHSHLSMDFDQVSIISLLFLFVDSVRDIKQRVVKHIISVILENFTDLQSKSNLAKVEKLNSQSQSQLVQQFPKGGDLHSLSDISKKNASLLNGVTGTETEPKLDTGKDPAYWSKICLYNMAKLAKEATTVRRVLEPFFHNFDAENYWSSEKGVASCILQYLQSLLAESGDNSHLLLSILVKHLDHKNVAKQHILQIDIIKTTTQLAQNVKQQASVAIIGAISDLVKHLRRCLQNLAEASSIGDATYRLNTELQSVLEMCILQLSKKVGDIGPILDLMAVALENIPVTTITARSTISAVYQTAKLVTSIPNVSYHNKAFPDALFHQLLLVMVHPDYETQIGAHKIFSLVLTPSMVSPWLDHKTITAHKAQNDCFCNPPETFSGDENWNGKLEEEKTISGVKGKKYAIHPYRGYSFSPKLIDGNEDQSALRLSSHQVSLLLSSIWVQATSVGNGPSNYEAMAHAYSIALLFICSKVSSHMGLARSFQLAFSLRRVALDQQGEIYRQIFTLETLRNLVPMESRLEKAGSLRDLIPIVKASLTKETVDPFLELVDDIRLLAVCKETGKITYGSEEDEAAAVKSLSAVELDDKQLKETVISYFMTKFSKLSEDELSSIKNQLVQGFSPDDTYPLGPLSFMETSRPCSPLPLIELPSFDEIMIPDDLTEVETGPEHSGSQSDRKTSQSTNHPDVLSVNQLLDSVLETARQVASFSTPSTPLPYDQMKDQCEALEAGKQQKMSVIQSFKHQQESNAIILSSENEVTVAPLHAKALEYSKSDLKLVTQETFKAQDQGRNHYHDYGLQHSLKLPPSSPYDKFLRAAGC 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00405 1030 MobiDBLite consensus disorder prediction 874 896 - -
Vimu4g00405 1030 PANTHER PUTATIVE, EXPRESSED-RELATED 1 1030 - -
Vimu4g00405 1030 SUPERFAMILY ARM repeat 72 587 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00405 Vimu-Chr4 2886803 2895852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00405 K21842 - gmx:100806860 1495.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00405 4 2886803 2895852 Vimu4g00405 4 2886803 2895852 ECH
Vimu4g00405 4 2886803 2895852 Vimu5g02235 5 33580959 33589487 PCT