Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02200 ATGGCTACAACAGCAACATCAGCGCAGGTTTTCAAAGACTACAAGGACACCAATAATGGCAACCCTGAAATTACGAGGCAGGAAATTCAGGCGGCCATAGCCAAAGCAGTGGAGCTGAGAGCTCTTCATGCGGCTTTGATGCGAGGAAATAGCCCAGCCAATGCTAGATTCCCATCCCCTTCCCCTGCTTCGCGCCCTATTTCTCACTTCTCTGCCCAAGATTACCCTGTTTTCACTCCAGTGGGTATTAGCTATGAAGATGATCCACTGGTGGGGTACAATCAAAACTCTATGAAAAGCCTTACAGTATCAGAAAGTTGGGATGGGAGTCTTCTAGAAGGAGGAAACAGTAGAGAAACCATTATAGCAGATTACAAGGAGAAATCAAGTTCAAGAAAAGGACTATATTCTGGTTTAGCGAACGTTGATTCTCACACATGCCCTACTGATGATGCCAAATCTGTGACGGGCTCTTGCGCAAATCAAATTACTGTTCTGCAAACATCACCTGCAAATGATTACTCCAAGGGTAGGAGGAGAAACAGCATGGAGGATTTCAAGTCCATATCCTCCTGCAATAAATGCAACCCTGCCACCATAACTAGCGATTTTGAGAATGCAAGGAGCAGCAAGAGCTCCAACATTATTGTCCCAGTTACGGATTCACACTCATCTCTTCAATCCCAACCCAAGAGCAAGGGGGTGATTTCTTGGTTGTTTCCCAGGTTAAAGAAGAAACATAAGAATGAGAATTCCCCTAATAGAGCAGAATCTGAGGATGTTTCTCAGGTTCTCAAGGACTTGGGAATAATGTCAATGGAGACATTGAAGAAAGAGCTGGTGGAAGCAAATGAGAACCGAGATGTGGCCTTAATGGAAGTTTCTGAGATGAGAGGTTCATTGGGAGAGCTGAAACAGAAGCTGGAGTACTTGGAAAGTTACTGTGAAGAGCTGAAGAAAGCTCTCAAGCAAGCCGTGAAGACAAGGGATTCTCAACTTTGTGACCAACTTACTAATCTTCCTCAGAGGGGGAAACTATTTGAAGGAAATGGGGAAAATGTGATGCCTGTGAGTGAAGAAGTAATGGTAGAGGGATTCTTGCAGATAGTTTCAGAGTCCAGATTATCAGTGAAGCAGTTCTGTAAGACCCTTATTACCCACATTGAAGAGACTGATCATTCTTTGACAGAAAATTTGAACTTGCTTCTCCAACCATACAAGTTATCTCTGAGTTCCAAGTTCTCAAAGGCAGTTCTATACCATTTTGAAGCTTTTATAAATCAGTGTCTCTACCAAGACTTTGAGAATTGTGTTTTCCAAAAGAACGGTTGTTCAAAATTCCTAGATCCGCAGCAGGATCGTCAATCACAATTCTCTTCTTTTGTTGCCCTTAGAAATTTGAGCTGGAATGAGGTACTGAGAAAGGGAACAAAATATTACAGTGAAGAGTTTAGCAAGTTCTGTGACCAGAAAATGAGTTGTATCAACACTACTTTAAAATGGACAAGGCCATGGCCTGAACAGCTTCTTCAAGCTTTCTTTGTGGCGGCAAAATGCATGTGGCTGCTACATTTGCTTGCCTTTTCTTTCAACCCTCCGTTGGGAATTTTAAGGGTTGAAGAGAATAAAATCTTTGATCCTCACTACATGGAAGATATGTGTCCAAGGTCCCAAGGGCCAAGCAGAGTTAGGATCATGGTGATGCCGGGATTTTATGTTCAGGATAGGGTCTTGAGGTGTAAAGTTCTTTGCAGGTACAAGTCTGCAGCCTAA 1773 0.4292 MATTATSAQVFKDYKDTNNGNPEITRQEIQAAIAKAVELRALHAALMRGNSPANARFPSPSPASRPISHFSAQDYPVFTPVGISYEDDPLVGYNQNSMKSLTVSESWDGSLLEGGNSRETIIADYKEKSSSRKGLYSGLANVDSHTCPTDDAKSVTGSCANQITVLQTSPANDYSKGRRRNSMEDFKSISSCNKCNPATITSDFENARSSKSSNIIVPVTDSHSSLQSQPKSKGVISWLFPRLKKKHKNENSPNRAESEDVSQVLKDLGIMSMETLKKELVEANENRDVALMEVSEMRGSLGELKQKLEYLESYCEELKKALKQAVKTRDSQLCDQLTNLPQRGKLFEGNGENVMPVSEEVMVEGFLQIVSESRLSVKQFCKTLITHIEETDHSLTENLNLLLQPYKLSLSSKFSKAVLYHFEAFINQCLYQDFENCVFQKNGCSKFLDPQQDRQSQFSSFVALRNLSWNEVLRKGTKYYSEEFSKFCDQKMSCINTTLKWTRPWPEQLLQAFFVAAKCMWLLHLLAFSFNPPLGILRVEENKIFDPHYMEDMCPRSQGPSRVRIMVMPGFYVQDRVLRCKVLCRYKSAA 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02200 590 Coils Coil 273 293 - -
Vimu5g02200 590 Coils Coil 301 321 - -
Vimu5g02200 590 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 24 588 IPR042316 -
Vimu5g02200 590 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02200 Vimu-Chr5 33299537 33301991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02200 - - vra:106756465 1146.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00441 4 3217071 3219082 Vimu5g02200 5 33299537 33301991 PCT