Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00441 ATGGCTGCAACTGCAACCGCAAAAAGTTTACAGAACCATAACAACCAAAGCGTCAACGGCAACAACCCTGACATAACAAGGGAAGAAATCCAAACCGCCATAGCCAAAGCAGTAGAACTAAGGGCCCTTCATGCTGCATTAACCCAAGGAAGTAGCCCAGGCACAACCAACGTTAGATTCCCATCACCTTCCTCTGCTTCTCACTTCTCTGCCCAAGATTACCCTGTTTTCACACCAAGTTATGAAGACGAGACACATCAGAACCCAACAAGGAGCAGAACAATATCAGAAAGTTGGGATGAGAATGGGGTAGATGGAATGAACAGCATGGCTCCCTCAGATTACAAGGAGAAATCAAGTTCAAGAAAGGGGCTAACTTTTGGATTTGGCAACCATGACTCTCACATGTGTCCTGCTGATGATAGTAAATCTGTGAGTGGTTCTTGTGCAAATCATATCACTGTTCTCCAAACATCGCCTGCAAATGACTACTTCAAATCCAGGAGGAGAAACAGTTCGGGGGATTTGAGGCCTTTGTCTTCCTGCAATAGGTGCAATCCTGCTGTCATAACTACTGAATATGAGAACACAAGGAACACTAGGAGCTCCAACATTGTTGTCCCCCTCACAGATTCTCATGCTTCTTTTCAAACCCAGCCAAAAAATAAAGGGGTGATTTCCTGGTTGTTCCCTAAGTTCAAGAAGAAGCATAAGAATGTAAGTTCCCCAGCTAGAACAGAATCTGAGGAAGTCTCTCAGGTTCTCAAGGACATGAGAATAATGTCAGTTGAGGCACTTAAGAGGGAACTGATGGAGGCAAATGAGAGTAGAGATGCTGCCATGATGGAAGTTTCTGAGATGAGATCTTCACTGGGGGACCTGAAACAAAAGCTTGAGTATTTGGAGAGTTACTGTGAAGAGTTGAAGAAAGCTTTGAGGCAAGCAATTCTCACCAAAGAAACCACACATTCTGAAAAGTTTAACAACTCTCCCCATAAAGGAACACCCTTTGATGGAAATGGGGAAAATTTGATGCCTGTAGGTGAGGATGTAATGATAGAGGGCTTCTTGCAGATAGTGTCAGAATCAAGGTTATCAGTGAAGCAATTCTGTAAGACCCTTATATGCCAGATTGAAGAAACTGATCAATCTTTGATGGACAACTTGAACTTGCTCCTCCAACCATATAGACTCTCCTTGAATTCCAAATACTCAAAGGCAGTTTTATACCATTTTGAAGCCTTCATAAACCAGGCCTTCTACCAAGACTTTGAGAACAGTGTGTTCCAAAAGAATGGCTGCACAAAATTCTTAGACCCTCGACAGCATCGTCAAGCACAATTCTCATCGTTTGTTGCACTTAGGAATTTGAGCTGGAACGAGGTGCTCAGAAAGGGGACTAAGTATTACAGTGAAGAGTTTAGTAAATTCTGTGACCAGAAAATGAGTTGCATCATCACTACACTGAATTGGACTAGGCCTTGGCCTGAGCAACTCCTTCAGGCTTTCTTTGTGGCAGCAAAGTGCATATGGTTGCTACATTTGCTGGCCTTTTCTTTCAACCCTCCATTGGGAATTTTAAGGGTTGAAGAGAACAGAAGCTTTGATCCTCACTTCATGGAAGATCTGGTTGCTGATAGACAGAGATCACAAGGTTCAAGCAGGGTTAAGATCATGGTGGTGCCAGGCTTCTATGTTCAGGATAGGATCTTGAGGTGTAGAGTTATTTGCAGGCATAAATCTGCACCCTAA 1752 0.4326 MAATATAKSLQNHNNQSVNGNNPDITREEIQTAIAKAVELRALHAALTQGSSPGTTNVRFPSPSSASHFSAQDYPVFTPSYEDETHQNPTRSRTISESWDENGVDGMNSMAPSDYKEKSSSRKGLTFGFGNHDSHMCPADDSKSVSGSCANHITVLQTSPANDYFKSRRRNSSGDLRPLSSCNRCNPAVITTEYENTRNTRSSNIVVPLTDSHASFQTQPKNKGVISWLFPKFKKKHKNVSSPARTESEEVSQVLKDMRIMSVEALKRELMEANESRDAAMMEVSEMRSSLGDLKQKLEYLESYCEELKKALRQAILTKETTHSEKFNNSPHKGTPFDGNGENLMPVGEDVMIEGFLQIVSESRLSVKQFCKTLICQIEETDQSLMDNLNLLLQPYRLSLNSKYSKAVLYHFEAFINQAFYQDFENSVFQKNGCTKFLDPRQHRQAQFSSFVALRNLSWNEVLRKGTKYYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEENRSFDPHFMEDLVADRQRSQGSSRVKIMVVPGFYVQDRILRCRVICRHKSAP 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00441 583 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 25 581 IPR042316 -
Vimu4g00441 583 MobiDBLite consensus disorder prediction 48 104 - -
Vimu4g00441 583 Coils Coil 263 283 - -
Vimu4g00441 583 MobiDBLite consensus disorder prediction 48 74 - -
Vimu4g00441 583 Coils Coil 291 311 - -
Vimu4g00441 583 MobiDBLite consensus disorder prediction 81 103 - -
Vimu4g00441 583 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00441 Vimu-Chr4 3217071 3219082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00441 - - gmx:100786740 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00441 4 3217071 3219082 Vimu4g00441 4 3217071 3219082 ECH
Vimu4g00441 4 3217071 3219082 Vimu5g02200 5 33299537 33301991 PCT