Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02198 TGCAGCGAACAACATAAAGAAGAAGAGAAAGTGATAATCACACGCAACATGACCATGGATCGGTTATCTCAGAGCAGTTCAGACTCACCTAACAGAGACACCAAAGTGTTATCCATAGAGTGTTTGAAGGGAAGTTCCAAAGCCGACGAGTGGACCGGTGACATGCTTCAAACCGGTGACATCGTCGAAGAGCTTCGAATCGGAGACTCCCCCAACGCCCTTATCCGCTTCAAATCGCCCTTCAAAAACGGCAAAACCGCCGTCAACAAAATCCTCCAAGACTCTTACAAGAAGAAAGAAACCTCCATCCTGGTTCGAGTTCGACGTGGATCCCACGATTTCGCCGAGTTGCAGGCCTGTATAGTTCCCAATGATTCCTCCGGGAAGAAGCACTACGTTCTCCGTTCCATCACCGACCCTAACTACGTCGTTGGCTTCCTTGATCGAACTGAATCCGAGTGTTTCCAACTCCAAGCTTCGAGGAGCACCAGAATGGTAAATGCACTAACCAGGACACGGTTACAAGATGGATATGTTTCGTATCCATGGGAGAGGAAGATGCAGGAGTTGCTGTCAGTTCCCACTTCTAGCAATTTTCTTTCCATATTACTTCTTCCCAAAGTTTCAGATCGAATAGCTTTTCGCTACAACGATGTAGAAGACACGCTAGCCAGGGCAAATACGTGGTTGAATGCAGCTCAAGCCTCAGGGGTCCCTATTGTCTTTATGAACGTCCAAACCGAGTCCCTACTTACTAAGATATCTGGAGAGACAGCTTCTTCCACCGTAAATGCAGGGTCATTGTCTGACTTATCTAACCTTGCAAATGTAAGTCTTTATGGCTTTGAGGATTATCATGGAGTGGACATTGGTGTTGTTAGAGCAGTTCGTCTCTGGTATGCTCCAATTGGAGGAGAGTTCACAATTGAGATAAAACTAAAAGAGGATGACACAAAGCTTGGCTTTGGCATTAGTCGAACAGAAGAGGGTTTTATTTTCATCTCAACAGTTACTGATGAGGGCCAAGAAAATGTACCTGCCACGCGTTCAGGACTGAGCAATCTGTATAAAGCAGCAACAGATACATCGAGGTTGCTGGTAGTGTCTAGGATTTCAAATCAGAGAGTCCTTCCATGGATGGTGTCTTCAACAGGAGCCATCAGGTGTTATGACACTGTTTCCTTGAGTCAGAAACTCTCCTTGCATAGACACACCAAAGTTCCTATTCTCCTTCACGTCTTCCTTTGGGACGGAACATTGGCCTCATCAAGTGTAGCAAGTACAAGATTGAGTAACATGTCTACCTCAGTGTTGCCATTGCCAATGTTACGCCATCCAAATGAAAACCAAATTTCTGATGCAGGTGGCGGTGTCAGTGGTGATGGATCCCTCTCAGTGCAGCTTGAGAGAGACACAGTTGGGGATCTCTCATTCAGATTCAATAACTTGTCCACTTTCAACAACTGCGTATGA 1473 0.4582 CSEQHKEEEKVIITRNMTMDRLSQSSSDSPNRDTKVLSIECLKGSSKADEWTGDMLQTGDIVEELRIGDSPNALIRFKSPFKNGKTAVNKILQDSYKKKETSILVRVRRGSHDFAELQACIVPNDSSGKKHYVLRSITDPNYVVGFLDRTESECFQLQASRSTRMVNALTRTRLQDGYVSYPWERKMQELLSVPTSSNFLSILLLPKVSDRIAFRYNDVEDTLARANTWLNAAQASGVPIVFMNVQTESLLTKISGETASSTVNAGSLSDLSNLANVSLYGFEDYHGVDIGVVRAVRLWYAPIGGEFTIEIKLKEDDTKLGFGISRTEEGFIFISTVTDEGQENVPATRSGLSNLYKAATDTSRLLVVSRISNQRVLPWMVSSTGAIRCYDTVSLSQKLSLHRHTKVPILLHVFLWDGTLASSSVASTRLSNMSTSVLPLPMLRHPNENQISDAGGGVSGDGSLSVQLERDTVGDLSFRFNNLSTFNNCV 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02198 490 PANTHER OS02G0717600 PROTEIN 16 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02198 Vimu-Chr5 33277737 33280271 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02198 - - gmx:100788800 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00444 4 3228012 3233736 Vimu5g02198 5 33277737 33280271 PCT