Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02192 ATGGAGCCTCAATATGCTTCTGTTAAAGCTATTCTTTATGGCCCTTATCTTCTTGCCGGTCATATAAGTGGTGGTGATTGGGACGACCTTAAAATTGAAGCTGACGATGCAGACTGGATCCTTCCTATTCCTGCCAGTTACAATAGCCAACTAGTTTCTTTTTTCCAAGATTTTGAAAAATCGACTTTTGTGTTGGCAAATTCAAACCAATCATTTGCAATGCAAAAGTTGCCTGAATCTGGCACTGATTTCGCTCTTAAGGCAACCTTTAGGCTTGTCCTGAAAGAGTCTTCCTCAAAGTTTTCAACATTAGCAGATGCTAATGATAGATCAGTGATGTTAGAACCATTTGATCTTCCTGGAATGAATGTGGTTCACCAAGGAGCAGATAAACCTCTTCTGATTGAAGATTCTTCCAAGGGCAAGCCATCTTCTGTTTTTGTTGTGGTACCAGGATTGGATGGAAGAAATGAAACCATATCTTTTGAATCACAGAGTGACAAGGGCTGCTACGTGTATAGTGGTTTGAGCTCTAGTGCAGGAGTCAAGCTCAGTTGCAAATCTGATTCTGATTCTTCATTTAACCAAGCTACAAGCTTTGTTGCTAGGGAAGGATTGAGCCAATACCATCCTATCAGTTTTGTGGCTAAAGGGGTTAGCAGGAAATTTCTTTTGCAGCCATTACTCTCCTTCAGAGATGAGCATTATACAGTATATTTCAACATTCAAGATTGA 735 0.4014 MEPQYASVKAILYGPYLLAGHISGGDWDDLKIEADDADWILPIPASYNSQLVSFFQDFEKSTFVLANSNQSFAMQKLPESGTDFALKATFRLVLKESSSKFSTLADANDRSVMLEPFDLPGMNVVHQGADKPLLIEDSSKGKPSSVFVVVPGLDGRNETISFESQSDKGCYVYSGLSSSAGVKLSCKSDSDSSFNQATSFVAREGLSQYHPISFVAKGVSRKFLLQPLLSFRDEHYTVYFNIQD 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02192 244 PANTHER PROLINE-TRNA LIGASE (DUF1680) 3 242 - -
Vimu5g02192 244 Gene3D - 103 233 - -
Vimu5g02192 244 SUPERFAMILY AbfB domain 140 224 IPR036195 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02192 Vimu-Chr5 33228762 33229655 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02192 K09955 - gmx:100781521 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00450 4 3259624 3265271 Vimu5g02192 5 33228762 33229655 PCT