Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02106 ATGGAAGACGGGCATAAGTTCCAGGATGTTCAAAAGCCAAAATATGATTGTCTTTTGTTTGATCTTGACGACACCCTCTATCCCTATAGTTCTGGAGTCTGTCAGCAAATAGCAAAGAACATCGAAGAGGCTGATAAAGTTGCCGAATTAAACGTTCCGCTGTATAAGATTTATGGAACAACGATGGCTGGTCTAAAGGCGATTGGCTATGACTTTGAGTTCGATGAGTATAATAGTTTTGTTCATGGGAGATTGCCATATAATGTGCTGTTGAAACCAGACCCTGTTCTCAGGGGAATTCTGCAAAGCTTGCCTGTTAGGAAGATTGATGATGATGATGATGTCTATTCTTGGTTTCTCTTTCAGATATTTACAAATGCAGATTCGAACCATGCAATTAGTGCACTTAAAATCCTTGGATTGGAGGACTGCTTTGAAAGAATCATAAGCTTCGACACTCTGAATCCCTCCAACAACACCAATCCTTCTGAATCTAAACCTACCACCGAGGAAGTTTTGAACATCTGTGAGCGTTTGCGCCGGCATGACTCTGATATGGTGCTTCCACGCACCCCCCTTGTCTGCAAACCCTTTGATGATGCATTTGAATATGCTTTCAAGATAGCAAACATTGATCCTCAGAGAACATTGTTTTTTGATGACAGCATCCGCAATTTACAGACAGCAAAACGCTTAGGCCTCCACACAGTTGCGGTGGGCACATCTGTTCGTACAACGGGAGTTGATCATGCATTGGAGAGTATTCATAATATGAGAGAGGCATTTCCAGAGCTTTGGGATGCTGAGGAGAAGCACGAATTTGTGCACTACAAGGCTGGAATTGAAACATCAGTAAAAGCTTAG 864 0.4236 MEDGHKFQDVQKPKYDCLLFDLDDTLYPYSSGVCQQIAKNIEEADKVAELNVPLYKIYGTTMAGLKAIGYDFEFDEYNSFVHGRLPYNVLLKPDPVLRGILQSLPVRKIDDDDDVYSWFLFQIFTNADSNHAISALKILGLEDCFERIISFDTLNPSNNTNPSESKPTTEEVLNICERLRRHDSDMVLPRTPLVCKPFDDAFEYAFKIANIDPQRTLFFDDSIRNLQTAKRLGLHTVAVGTSVRTTGVDHALESIHNMREAFPELWDAEEKHEFVHYKAGIETSVKA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02106 287 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 11 268 - -
Vimu5g02106 287 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 8 286 - -
Vimu5g02106 287 SUPERFAMILY HAD-like 13 265 IPR036412 -
Vimu5g02106 287 NCBIfam pyrimidine 5'-nucleotidase 16 238 IPR010237 -
Vimu5g02106 287 SFLD C1.5.3: 5'-Nucleotidase Like 11 268 IPR010237 -
Vimu5g02106 287 NCBIfam HAD-IA family hydrolase 191 239 IPR006439 -
Vimu5g02106 287 Gene3D - 72 266 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02106 Vimu-Chr5 32710729 32712654 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02106 K07025 - gmx:100807717 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00493 4 3571412 3573420 Vimu5g02106 5 32710729 32712654 PCT