Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02099 ATGGGCAGCCCCTCGAAGAAGAATGAAAGTAAGGGGTTTTTCTCCGCTATGTCTTCCATCTTCACCAACGCTATGCACCGATCAGTCAACGGGCTTCTTGGATATGAAGGTGTGGAAGTCATCAATCCAGATGGAGGTAAAGAAGATGCAGAGGAGGAAGCAGAGAGAGGAAGATGGAAACAAGAGGAAAGAGATGGTTACTGGAAGATGATGCAGAAATATATTGGCTCGGATGTAACATCAATGGTGACACTACCAGTTATTATCTTTGAACCGATGACTATGCTTCAGAAAATGGCCGAGTTGATGGAGTACTCCTACTTGTTAGATCAGGCAGATGAATCAGAGGATCCATACATGCGGTTAGTTTATGCAACATCATGGGCTATATCGGTGTACTTTGCTTACCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTACGAAATGACTAATCACGGCGGAATTACATTTCTTGCAGAACAGGTCAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTGAAAACTAAGTTTTTGGGAAATTCTGTTGACGTTTACCCTGTTGGAAGAACGCGTGTGACTCTTAAGAGAGATGGTGTAATCTTGGATCTGGTGCCACCTCCTACAAAGGTTAACAACCTCATATTTGGCCGTACTTGGATTGATTCGCCTGGGGAAATGATAATGACTAATCTGACAACTGGAGACAAAGCTGTACTATATTTTCAACCATGTGGATGTGCCGGTCGATACGAAGTGGATGGATATATCTATAATTCTTCCGAGGAGCCTAAAATATTAATGACAGGGAAGTGGAACGAGTCAATGAGTTATCAACAGTGTGATTCAGAAGGAGAGCCTCTTCCAAACACAGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCAAAGAATGACAAATTTCAGTATACATATTTTGCTCATAAAATAAACAGCTTTGACACTGCCCCTAGAAAGTTGTTGGCATCAGACTCTCGTCTACGCCCAGATAGATATGCACTTGAGATGGGTGATCTGTCAAAATCCGGGGCAGAAAAGAACAGTTTGGAGGAGAGGCAGCGTGCTGAAAAGAGAACCCGAGAAGAAAAAGGCCATAAGTTCGTGCCTAGATGGTTTGATTTAACCGAAGAAGTGACACCAACTCCTTGGGGTGATTTGGAAATCTATCAATATAATGGTAAATACATTGAACATCGGGCTGCTGCAGATAACTTGGGAAGCATTGATGATTGTGATGTTAAATCAATTGAATTCAATCCATGGCAGTATGGTAATTCGGCCACGGAATGA 1359 0.4246 MGSPSKKNESKGFFSAMSSIFTNAMHRSVNGLLGYEGVEVINPDGGKEDAEEEAERGRWKQEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADESEDPYMRLVYATSWAISVYFAYQRTWKPFNPILGETYEMTNHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVILDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQPCGCAGRYEVDGYIYNSSEEPKILMTGKWNESMSYQQCDSEGEPLPNTELKEVWHVADVPKNDKFQYTYFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDLSKSGAEKNSLEERQRAEKRTREEKGHKFVPRWFDLTEEVTPTPWGDLEIYQYNGKYIEHRAAADNLGSIDDCDVKSIEFNPWQYGNSATE 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02099 452 Gene3D - 354 438 - -
Vimu5g02099 452 MobiDBLite consensus disorder prediction 362 384 - -
Vimu5g02099 452 FunFam Oxysterol-binding protein-related protein 3C 354 447 - -
Vimu5g02099 452 Pfam Oxysterol-binding protein 67 422 IPR000648 GO:0008289
Vimu5g02099 452 SUPERFAMILY Oxysterol-binding protein-like 61 425 IPR037239 -
Vimu5g02099 452 MobiDBLite consensus disorder prediction 367 384 - -
Vimu5g02099 452 FunFam oxysterol-binding protein-related protein 3C 148 323 - -
Vimu5g02099 452 ProSitePatterns Oxysterol-binding protein family signature. 164 175 IPR018494 -
Vimu5g02099 452 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 55 422 IPR000648 GO:0008289
Vimu5g02099 452 Gene3D - 148 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02099 Vimu-Chr5 32670797 32675984 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02099 - - gmx:100810228 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00500 4 3630305 3636310 Vimu5g02099 5 32670797 32675984 PCT