Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02067 ATGCCTTCAGTTTACATGGGGGGTAGGATGGATAATTCTACCTCGAGCATGGGAACTAATTCTAAAGAAAGCAGCGTTGTCGATGGGAAAAATACATATAAAAACCTTCTGGTTGCATCACGGCCTAAAGGCTTTGCACAGAGAAATTATGAACAACTCGTATCATTCACCCATGGTGACTTTGGAAGCAGTGTTGTGGGTCGTGCCACTTTTTTTTTACTCAAAGTTGCTGCATTAGAGACCGTGAGGAGGTTATCCAAGAGTAAATGCCCGTGTGTATGGCGAGGCCTCCAGGGTCTACAAATCCTTGTCTATCCACCTTTCAAATGGATTCAGAGGTGGGCACCCTTCAGGGGTTTGGTGAAGAGCATGCAGGTACTATCAAGACCACTTTTAGTTCTTTCGATTGCAACAGTCTTTACTGATCAACCACAATGTAGTGATGGAACCTCAGATTGTGTTGTTGATTCTCCTGAATCTGAGGAATCTGCCGAACTATCTCCTGCACAGCCTATCTCGAATACAAGTCATTCTGAGATAGATCCTGAAGTTTTAGAATATGAAAACTGGTTGACTCTACTTAATCAAGAGTTGAAAACTCAAGGGATTAGTTTGCCAGAAAGAATCAATGATGATGAGCTCCACAGATTTTACGCAGCTTCTAATAATGACTTTTCATGCTTCCTTGCCTCAATCAAGAAGACAATACGGTGGCGGGAGAGTTATAGATTTTTTTCAGGAGAAGAGCTGGAAACTTGGTCAAATATGGTGTTCTGGCATGGATTTGATGTTTTGCACAGACCTTGCCTCGTTGTAAGGCTTGGGATAGCTTGTCGCTCTTTGGCGTCTGAAGATAGACTTCAGTTTGCTCAGGCAATTAGTATGTTAATCTTAATCAGTGGTTGTACTGCAGTATCACAGGTAGAATATGGAGTCTTGCACTTGGTAGATGCAAACAACCCTCAAATTGCAGTATTGGTGGACTGTGAAGGGTTATCTCCGTTGAGAATTCCCATGAAAGTGATGAGAACTTGTTCATCCATTCTGCAAGATTACTTTCCCAATCGACTTGGTTGTTTGTTTGTCATCCGACTACCAGCAATTGTTCGTGTTATTGCCCAGACTTTTATTCAGGTTCTAAAGCCGACAACTAAGAAGAAGTTGAAATTAGGGGGAGAGATATATTGGAAAGAACTTTTTGACAATTTTCCGACACCACCATCGTATCTTGGAGGAAGATGCACTTGCATGAGATGTTCTAAAATTGGCAACTGGGATATGCTGCAACCTCATTCAACTGGGACAAACATAATTGATAGGCAACAGGATATCGGTGACAATGGGGGATTGCCATCACTGCCATCTAATGAATTAGATGCCCGCCAAGTAAGTAATTCTGACCAGCTTTTGAGAAAGGCCGTCATAAGTTTTCTCGTATTTTGGGTTTTCATAGCTCTTGGTGCTGGAATTTACGATCCTGGTAGTCTTCATTTAGCACCATAA 1503 0.4198 MPSVYMGGRMDNSTSSMGTNSKESSVVDGKNTYKNLLVASRPKGFAQRNYEQLVSFTHGDFGSSVVGRATFFLLKVAALETVRRLSKSKCPCVWRGLQGLQILVYPPFKWIQRWAPFRGLVKSMQVLSRPLLVLSIATVFTDQPQCSDGTSDCVVDSPESEESAELSPAQPISNTSHSEIDPEVLEYENWLTLLNQELKTQGISLPERINDDELHRFYAASNNDFSCFLASIKKTIRWRESYRFFSGEELETWSNMVFWHGFDVLHRPCLVVRLGIACRSLASEDRLQFAQAISMLILISGCTAVSQVEYGVLHLVDANNPQIAVLVDCEGLSPLRIPMKVMRTCSSILQDYFPNRLGCLFVIRLPAIVRVIAQTFIQVLKPTTKKKLKLGGEIYWKELFDNFPTPPSYLGGRCTCMRCSKIGNWDMLQPHSTGTNIIDRQQDIGDNGGLPSLPSNELDARQVSNSDQLLRKAVISFLVFWVFIALGAGIYDPGSLHLAP 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02067 500 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 10 493 - -
Vimu5g02067 500 MobiDBLite consensus disorder prediction 1 26 - -
Vimu5g02067 500 SMART sec14_4 251 415 IPR001251 -
Vimu5g02067 500 Gene3D - 186 442 IPR036865 -
Vimu5g02067 500 MobiDBLite consensus disorder prediction 8 26 - -
Vimu5g02067 500 CDD SEC14 248 376 IPR001251 -
Vimu5g02067 500 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 259 418 IPR001251 -
Vimu5g02067 500 SUPERFAMILY CRAL/TRIO domain 254 417 IPR036865 -
Vimu5g02067 500 Pfam CRAL/TRIO domain 255 411 IPR001251 -
Vimu5g02067 500 MobiDBLite consensus disorder prediction 145 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02067 Vimu-Chr5 32440650 32445620 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02067 - - gmx:100814843 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00524 4 3821004 3824811 Vimu5g02067 5 32440650 32445620 PCT