Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00524 ATGACTGAGAATAGAGAATACAGAAATCTGCTAATTGAATTTCATCCTAAAATTTTTGTCAAGAGAAACAATGAATATCTCACTTTGCTGCTTCGTGGCCGCATTGGAAGAAGTGTTGTGGGTCGTATCACAATTTTCTTACTTAAAGTTGCTGCTTTAGAGATCATAAGGAGGTTCTCCAAGAGCAGATGTCCATGTGTATGGCGAGGCCTTCAGGCTCTACAAATCCTGTGTTATCCACCTTTTAAATGGATTCAGAGGTGGGCACCCTTCAAGGGTTTGGTTGGCAACATGCAGGACTTGAAGCCTGCTACTAGAAACAAGGTGAAAATAGAAGGGGAAATGTTTCAGAAAGCTCTTGCGGACTATCTGCCAACACTGCCTTCATATCTTGGAGGCTCCTGCACTTGCGTGAAATGCTATACTGTTGGCCCACGGGATATGCTGCAACCTTATGTGGCTGGGACCAGCAGGAGAGACAGGGTGGAGAACACCAGTGACAGTGACAATGAGGATCCTGCAATGTTGCATCCTTCCAATGAATTAGAAGGCGGCTTATATGGTCAATATAATCAGTTGTTGAGAGCTGCTATCGTAGGTATTCTTATATTTTGGGCTTTTGTAGCCCTTGGTGCTGTAGTATTTGAACCCAGTAATCTTCACCTGCCCTGA 672 0.4405 MTENREYRNLLIEFHPKIFVKRNNEYLTLLLRGRIGRSVVGRITIFLLKVAALEIIRRFSKSRCPCVWRGLQALQILCYPPFKWIQRWAPFKGLVGNMQDLKPATRNKVKIEGEMFQKALADYLPTLPSYLGGSCTCVKCYTVGPRDMLQPYVAGTSRRDRVENTSDSDNEDPAMLHPSNELEGGLYGQYNQLLRAAIVGILIFWAFVALGAVVFEPSNLHLP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00524 223 SUPERFAMILY CRAL/TRIO domain 101 151 IPR036865 -
Vimu4g00524 223 MobiDBLite consensus disorder prediction 158 177 - -
Vimu4g00524 223 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 16 101 - -
Vimu4g00524 223 MobiDBLite consensus disorder prediction 160 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00524 Vimu-Chr4 3821004 3824811 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00524 - - var:108332471 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00524 4 3821004 3824811 Vimu4g00524 4 3821004 3824811 ECH
Vimu4g00524 4 3821004 3824811 Vimu5g02067 5 32440650 32445620 PCT