Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02050 ATGGCGGAAACAACCCCTGCTTCTGTTTCTTCTTCCGCGGGTGATTCGAATTGGAGAGAGAACAAGTTGGTGAAAGGATCATTTGCGGTCTCCGGAATCATGCTCACCCTCGTTACCTATGGCATCTTGCAGGAAAAGATCATGAGAGTCCCTTATGGGGTGAACAAGGACTACTTCAAATATTCTCTTTTTCTCGTTTTCTGCAACCGCATCACGACGTCTGCTGTTTCGGCTGGGGCTCTAGTGGCACGGAACAAAGTTTTGGAACCTGTTGCCCCCATTTATAAGTACTGCCTTGTGTCAGTATCGAACATTCTTACCACAAGTTGTCAGTATGAGGCCCTCAAATATGTTAGTTTCCCTGTTCAGACTCTTGCAAAGTGTGCTAAAATGATACCAGTTATGGTCTGGGGCACAGTCATAATGCAGAAGAAATATCGAGGAACTGACTATTTGCTGGCCTTTATAGTAACCCTTGGCTGCTCCGTGTTCATTCTCTATCCTGCAGGGACCGACATAAGTCCATACGGTAGAGGAAGGGAAAATACTGTTTGGGGAGTTTTGCTAATGCTTGGTTATCTTGGGTGTGATGGTTTTACAAGCACTTTCCAAGATAAGATGTTTAAAGGCTATAACATGGAGATACATAATCAGATATTCTATACTACTTTGTGCTCTTGTGTTCTTAGCCTGACAGGCCTTATCATACAAGGACAACTATTACCAGCAGTAGAATTTGTATATCTCCATAAGGATTGTTTCTTTGACATTGCATTGCTTTCAACAGTTGCAACAGCTAGTCAATTTTTTATTTCCTACACAATTCGCACATTTGGTGCTCTAACATTTGCTACAATAATGACAACTAGACAGTTGGTAAGCATCATTCTATCATGTGTGTGGTTTTCCCATCCTCTTAGCTGGGAACAATGGATTGGAGCTGTAATTGTCTTTGGTGCAATTTATTCAAAAAGCTTCTTGAGGAAAGCACCCGAAAAGACAACAACCTCATCTGTAGAACATGTACAAAATGGAAATTCAAATAATTTGAAGGAGAACCCATGCTAG 1068 0.4157 MAETTPASVSSSAGDSNWRENKLVKGSFAVSGIMLTLVTYGILQEKIMRVPYGVNKDYFKYSLFLVFCNRITTSAVSAGALVARNKVLEPVAPIYKYCLVSVSNILTTSCQYEALKYVSFPVQTLAKCAKMIPVMVWGTVIMQKKYRGTDYLLAFIVTLGCSVFILYPAGTDISPYGRGRENTVWGVLLMLGYLGCDGFTSTFQDKMFKGYNMEIHNQIFYTTLCSCVLSLTGLIIQGQLLPAVEFVYLHKDCFFDIALLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSIILSCVWFSHPLSWEQWIGAVIVFGAIYSKSFLRKAPEKTTTSSVEHVQNGNSNNLKENPC 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02050 355 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 20 329 IPR013657 GO:0055085
Vimu5g02050 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 322 - -
Vimu5g02050 355 Pfam UAA transporter family 27 325 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02050 Vimu-Chr5 32330076 32334663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02050 19 335 Organic Solute Cotransporters AT5G59740 81.703 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02050 K15276 - gmx:100782423 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00553 4 3991240 3997832 Vimu5g02050 5 32330076 32334663 PCT