Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02015 ATGTCCACCCCAACTTCAAACCTATTCCGAGAATACATAGGAGCGGAGTTCAACAACGTTAAATTCTCCGATGTTCCCATCAACCCAAGTGTCCAGTTCCACTTCATTCTCTCCTTCGCCATTGACTACGACACCTCATCAACCTCTTCTCCAACAAACGGAAAATTCAACGTCTTCTGGGACACCGACAACCTTAACCCTACGCAAGTCTCAGCCGTGAAGGCGAAAAACTCAAACGTCAAAGTAGCCCTGAGTCTCGGAGGAGACAGCGTGGGAGGAGGCTACGCTTACTTCAACCCCTCATCGATCGATTCCTGGGTTTCCAACGCCGTTTCAACACTCACAAGCATAATCAAAGAGTACAACTTGGACGGAATCGACATTGACTACGAGCACTTCAAA 402 0.4801 MSTPTSNLFREYIGAEFNNVKFSDVPINPSVQFHFILSFAIDYDTSSTSSPTNGKFNVFWDTDNLNPTQVSAVKAKNSNVKVALSLGGDSVGGGYAYFNPSSIDSWVSNAVSTLTSIIKEYNLDGIDIDYEHFK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02015 134 PRINTS 2-S globulin family signature 6 19 IPR000677 -
Vimu5g02015 134 PRINTS 2-S globulin family signature 70 88 IPR000677 -
Vimu5g02015 134 PRINTS 2-S globulin family signature 53 68 IPR000677 -
Vimu5g02015 134 Gene3D Glycosidases 5 134 - -
Vimu5g02015 134 Pfam Glycosyl hydrolases family 18 34 131 IPR001223 GO:0005975
Vimu5g02015 134 PANTHER CHITINASE 2-LIKE 4 134 - -
Vimu5g02015 134 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 7 134 IPR001223 GO:0005975
Vimu5g02015 134 SUPERFAMILY (Trans)glycosidases 6 134 IPR017853 -
Vimu5g02015 134 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 123 131 IPR001579 GO:0004553|GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02015 - - vum:124843731 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00569 4 4122807 4123610 Vimu5g02015 5 32074959 32075429 PCT