Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00569 ATGTTGTCCATTTTCCGTCAATACACCTTCGACGACTCCTTCGAACAAGTCTTCGTCTCGAACAAGTTCCTGAAGGAGTACCAGATCGCACTCACCTTCGCCACCGACTACGACGACGACGACCACCCCACCAACGGCATCTTCCGCCCCACCTGGGACCTCCAGAAGGTCACACCGGAAGCCATCGAGCTGTTCAAGGAGAAGGGCCGCAGCATGGACGTGGACGTGAAAGTGTTCATCTCCATCGGCAACCGTGGCACCCACCAGCCCTTCAAACCCCTCGACAACAACACATGGATCGCCAACGCCACCCAGTCCCTCACAAACCTCATCCAGTGCAAGGAGCCGAACCTCCGCGTGGACGGCATTGACGTGCTGTACGAGCAAATCGATGCCTCCCCCGGTGACTTTATCCAGTGCGTGGGACAGCTGATAAAGAACCTCAAGGAGAATGGGGTAATAACCGAAGCTTCGATTTCCCCCACGTTTAACCTGAACAAGGATTTCTACTCTCGTTTGTATAGTTCTGTGTCGTTCTTGGTTGATTTTGTGGATTACCAGTTCCAGAAGGAGGTTGATTTTGTTATGAATCCCGGTGTACTGTTGCAGAGGTACAATGAACTCACCAAGGTTTATCCGAGAAGGAAGCTGTTGGCTGGGTACAGCGCAGAGAACGAGGACTGGACCACTCTTTCACCCATCGTCTTCTTCCTCGGTGGCATGGACATTCTCAAGAAGAGAAAGGCTCCTGGAATTTCCATTCATTACCATAATTTCTATGCTCAATCTTCTCCTCAACAATGA 804 0.5137 MLSIFRQYTFDDSFEQVFVSNKFLKEYQIALTFATDYDDDDHPTNGIFRPTWDLQKVTPEAIELFKEKGRSMDVDVKVFISIGNRGTHQPFKPLDNNTWIANATQSLTNLIQCKEPNLRVDGIDVLYEQIDASPGDFIQCVGQLIKNLKENGVITEASISPTFNLNKDFYSRLYSSVSFLVDFVDYQFQKEVDFVMNPGVLLQRYNELTKVYPRRKLLAGYSAENEDWTTLSPIVFFLGGMDILKKRKAPGISIHYHNFYAQSSPQQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00569 267 Gene3D Glycosidases 3 266 - -
Vimu4g00569 267 PANTHER CHITINASE 2-LIKE 4 258 - -
Vimu4g00569 267 Pfam Glycosyl hydrolases family 18 63 232 IPR001223 GO:0005975
Vimu4g00569 267 SUPERFAMILY (Trans)glycosidases 28 255 IPR017853 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00569 - - gmx:100776259 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00569 4 4122807 4123610 Vimu4g00569 4 4122807 4123610 ECH
Vimu4g00569 4 4122807 4123610 Vimu5g02015 5 32074959 32075429 PCT