Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01995 ATGAGTGTAAGGATATTGTTTAACATGGCTACAAGAAGTGGATCCTCTGAGGTGCCTCAGAAGGTGTCACCTCGTGCTGTGCGCCAACTAAGGCCTACTACTGTGGACACTGATTCTGTATCTTCTTCAAGTCAGGCTAATAAATCATCAAAGGAGAGAAGCCCCAAAGTTACTGATCGCAGATCACCCAGAAGCCCAGTTGTTGAGAGGAAGCGCCCCAGCAAAATATCTGAATTGGAATCTCAAATTTCTCAACTCCAAAATGATTTGAAGAAGGTGATGGATCAGCTTGTTTTGTCTGAATCAAGCAAGAGGCAAGCGCAGCAAGATGCCCTGGAGTCCAAGGAGCAACTATTAGCTCTATCTGCAAAATTTGAAGACTCACAAAAACACGTTTTGGATCTTTGTGCTGCTGGGGAAGGTCGTGTTCTTGAACTGCAGAAAATCATAGATGAGCGTGATATGGCATGCCAATCTGAACTTGAGGCCTCCAAAAAGCAGCTATCAGTTGAGTCTGCTGCCTTGGCCTCTGCAATGAATGAAATTCAGATGCTGAAGACCGAACTTGAATTGGTAGCCAATTGTGAGAGTGTACAATCTCAACAGGCAAAATCAGCAGACATGGAGCTACTAAACCTGAAGCAGAACTTGTCTGAAGCTCTTTCTCTTGTGGACACCATGAAAAACCAACTAAGGGATTACAAAGAATCTGAAGCTCAGGCCCAAGCATTGGTCAATGAAACCATGTTGCAACATGAGGCTGCAAAAAAATCTATTGAGATTCTAAGAGCAGATGTTGCAAAAGCTGTTGATGCCTACAACACTATTGCTTTGGAGTTGGACCAGTCCAAAGCACGGGTAAACTCACTAGAGGCCCTTGTTAGCAAGCTTCAGACAGATCCCATCAGTAGCAAATTTGAACACCAACCTGAAATATGGATAGAGGGAGAGGGTTCTGATGATCTAGAAGCACAAGTTATTTCTTTGAAGTCTGAGGTTGGACGCCTGCAATCTGCTGTAGAGACTGCTGAGACTAAATACCAAGAAGAAAAGATTCAAAGCACAGTGCAGATCAGGAGTGCATATGAGCTGGTGGAGCAGATAAAATCTGAAACTGGTAAGAGGGAAGGTGAGCTAGAGGCCGAGTTGAAAAGGAAGAAAGCTGACATTGAAGAGTTGAAGGCTAACCTGATGGATAAGGAAACTGAGTTACAAGGCATTATGGAGGAGAATGAGAATTTGAACACCAAGCTCCAAGAGAGCATGTCATCCAAAAATGAGCATGAACTCAAAAGGGAAACTAAAAGACTAGAAGAATGTGTGGCTGAACTGAAGTCAGACATGATGGACAAGGAGACAACACTGCAAAGCATATCTGAGGAGAATGAAATGCTGAAGATGGAAATCAACAAGCTCTCAGACGGTGGCAAAGTGAGTGAGGAAGTTGCAGCTGAGGTAGAGGGAGCTAAGGCCGCAGAACGAGAGGCTCTGATGAAACTTGGGATTGTGATGGAGGAAGCAGATAGGAGCAACAAGAAGGCTGCAAGAGTGGCTGAGCAGCTAGAAGCAGCACAAGCAGCAAATTTAGAAATGGAAGCAGAACTGAGAAGACTAAAGGTGCAGTCTGATCAGTGGAGGAAGGCTGCAGAGGCAGCTGCTGCTATGCTTTCGTCAGGAAACAATGGGAAACTCACAGAGAGAACTGTGTCTCTGGATAACAACTACAAGTGCTCACCCTATGCTGAAGACATGGATGATGATTTCCAGAGAAAGAAAAATGGCAACATGCTGAAGAAGTTTGGGGTCTTGTGGAAGAAGCCTCAAAAATAG 1830 0.4448 MSVRILFNMATRSGSSEVPQKVSPRAVRQLRPTTVDTDSVSSSSQANKSSKERSPKVTDRRSPRSPVVERKRPSKISELESQISQLQNDLKKVMDQLVLSESSKRQAQQDALESKEQLLALSAKFEDSQKHVLDLCAAGEGRVLELQKIIDERDMACQSELEASKKQLSVESAALASAMNEIQMLKTELELVANCESVQSQQAKSADMELLNLKQNLSEALSLVDTMKNQLRDYKESEAQAQALVNETMLQHEAAKKSIEILRADVAKAVDAYNTIALELDQSKARVNSLEALVSKLQTDPISSKFEHQPEIWIEGEGSDDLEAQVISLKSEVGRLQSAVETAETKYQEEKIQSTVQIRSAYELVEQIKSETGKREGELEAELKRKKADIEELKANLMDKETELQGIMEENENLNTKLQESMSSKNEHELKRETKRLEECVAELKSDMMDKETTLQSISEENEMLKMEINKLSDGGKVSEEVAAEVEGAKAAEREALMKLGIVMEEADRSNKKAARVAEQLEAAQAANLEMEAELRRLKVQSDQWRKAAEAAAAMLSSGNNGKLTERTVSLDNNYKCSPYAEDMDDDFQRKKNGNMLKKFGVLWKKPQK 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01995 609 Coils Coil 280 300 - -
Vimu5g01995 609 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 11 609 IPR029688 -
Vimu5g01995 609 MobiDBLite consensus disorder prediction 52 76 - -
Vimu5g01995 609 Coils Coil 504 548 - -
Vimu5g01995 609 Coils Coil 210 247 - -
Vimu5g01995 609 MobiDBLite consensus disorder prediction 1 22 - -
Vimu5g01995 609 Coils Coil 376 475 - -
Vimu5g01995 609 Coils Coil 76 96 - -
Vimu5g01995 609 Coils Coil 104 124 - -
Vimu5g01995 609 MobiDBLite consensus disorder prediction 30 51 - -
Vimu5g01995 609 Coils Coil 333 353 - -
Vimu5g01995 609 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01995 Vimu-Chr5 31748037 31750488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01995 - - gmx:100798862 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00589 4 4353747 4356227 Vimu5g01995 5 31748037 31750488 PCT