Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00589 AGTAGCTCCTCTGAAGTGCCTCAGAAAGTGTCCCCTCGTGGTGGTGGACGCCAACTCAGGCCTGCCACACTAGATACTGCATCTTCATCAAACCAAGCTCACAAAACTTCAAAGGATCATAGAAGTCCTAAAGTCACTGAGCGCAGATCACCCAGAAGTCCAGCTCCAGAGAGGAAGCGTCCTAGCAGAATATCTGAATTAGAATCTCAGATTTCTCAACTCAAAGAGGATTTGAAGGTTGTGAGGAACCAGCTCAGTTTGTCTGACTCATCCAAGAAGCAAGCTCAGCAAGATGCAGAAGAGTCCAAGAAACAACTATTGGCCGTATCTGTGGAACTTGAAGAATCTCAACAGCAACTTCTGAAGTTCTCTGCTACTGAACAAGCTCGTGTTAATGAGCTCCAGAAAACTATAGAAGAGCATGATAAGGCGTGGCAATCGGAACTCAAGGCTGCCCAACAGAAGCTATCAGACAACACTTCTGCACTGACCTCTGCTATCGATGAAATTCAGCAGCTCAAGGTTCAACTTGAATTGGTAGCTAATTGTGAGAATGCACACACCCAAATTGCAGAATCATCGGACGTGGAATTACTGAACTTGAAGGATAACTTGGCAGAATCACTTTCCCTTGTGGAGAACATGAGAAATCAACTCAGGGATTCTAAAGAGTCAGGTCAGGCACAAGCTTTGGTCAACGAGACTTTGCGACAACTTGAAGCTGCAAAAAGAACTGTTGAGTTCCTAAGAGCTGATGCTGCAAAAGCTGTGCATGGCTACAACTCTGCTGCTTCGGAATTAGACCAATCTAGAACACGGGTGGACACACTAGAGACACTAGTCAGTAAACTTGAGTTTGGCCTCATTAGTAACAAAGGCAACCATTCTTTAAATGTTGCAGATGATGGGAACATGGAGCTGAAAGCTGAGATATCACAAAAGCGTGAGGATCTTAATCACACTGAAGCAGAAATTTATTCTTTGAGGTCTGCCATAGAGACTGATGATGAGACTAAGCACCTGGAAGAACATATTCGGTGTTCAGTGAAGCTCAGGAAAGCCTATGAGTTGATTGAGCAGATAAAATCAGAATCAAGCCAGAGGGAATCCGAGCTAGAGGTAGAATTGAAAAGAAAGAATGCTGATATTGAATATTTGAAGGCTAATCTATTGGATAAGGAAACTGAGTTGCAGGGCATTGTAGAGGAGAATGAGAAATTGAATTTGCAGCTTCAAAAGAGAAATTCATCCCAAAGAGAGCTTGAACTTAAAAAGGAGCTTCGAAAACTAGATGAATGTGTGGCTGAGTTAAAGGGTGATCTAATGGACAAGGAAACAACATTGCAAAACATATCAGAAGAGAATGAAATTCTGAAGTTGGAGCTCAGTAAGAGGTTTGGACACGGTGGTAAAGTGGGGGAGGAAGTTGCTGCAGAACTTGAGGTTGCTAAGGCTGCCGAACGTGAGGCTGTTATGAAACTTGGTATTTTGATGGAAGATATTGAAAGGAGCAACCGAAAGGCGGAGAGGGTGGCTGAGCAGCTGGAAGCGTCTCAGGCAGCAAATTCAATAGTAGAATCTGAACTGAGAAGATTGAAGGTGCAGTCTGATCAATGGAGGAAGGCTGCAGAAGCAGCTGCTGCTATGCTCTCAGCAGGGAACAATGGGAAGCTGACTGAGAGATCAATGTCTTTAGACAACAACTATAACTCTATGATGAATAAGTACTCACCTTTCTGTGAAGAACTTGATGATGATTTTCAGACCAAGAAAAATGGCAACATGTTGAAGAAGATTGGGATCTTGTGGAGGAAACCTCAAAAATAG 1827 0.433 SSSSEVPQKVSPRGGGRQLRPATLDTASSSNQAHKTSKDHRSPKVTERRSPRSPAPERKRPSRISELESQISQLKEDLKVVRNQLSLSDSSKKQAQQDAEESKKQLLAVSVELEESQQQLLKFSATEQARVNELQKTIEEHDKAWQSELKAAQQKLSDNTSALTSAIDEIQQLKVQLELVANCENAHTQIAESSDVELLNLKDNLAESLSLVENMRNQLRDSKESGQAQALVNETLRQLEAAKRTVEFLRADAAKAVHGYNSAASELDQSRTRVDTLETLVSKLEFGLISNKGNHSLNVADDGNMELKAEISQKREDLNHTEAEIYSLRSAIETDDETKHLEEHIRCSVKLRKAYELIEQIKSESSQRESELEVELKRKNADIEYLKANLLDKETELQGIVEENEKLNLQLQKRNSSQRELELKKELRKLDECVAELKGDLMDKETTLQNISEENEILKLELSKRFGHGGKVGEEVAAELEVAKAAEREAVMKLGILMEDIERSNRKAERVAEQLEASQAANSIVESELRRLKVQSDQWRKAAEAAAAMLSAGNNGKLTERSMSLDNNYNSMMNKYSPFCEELDDDFQTKKNGNMLKKIGILWRKPQK 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00589 608 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 2 608 IPR029688 -
Vimu4g00589 608 Coils Coil 304 324 - -
Vimu4g00589 608 Coils Coil 369 410 - -
Vimu4g00589 608 Coils Coil 92 119 - -
Vimu4g00589 608 Coils Coil 434 461 - -
Vimu4g00589 608 Coils Coil 198 218 - -
Vimu4g00589 608 Coils Coil 232 252 - -
Vimu4g00589 608 Coils Coil 498 535 - -
Vimu4g00589 608 Coils Coil 124 144 - -
Vimu4g00589 608 MobiDBLite consensus disorder prediction 34 71 - -
Vimu4g00589 608 MobiDBLite consensus disorder prediction 1 71 - -
Vimu4g00589 608 Coils Coil 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00589 Vimu-Chr4 4353747 4356227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00589 - - gmx:100798050 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00589 4 4353747 4356227 Vimu4g00589 4 4353747 4356227 ECH
Vimu4g00589 4 4353747 4356227 Vimu5g01995 5 31748037 31750488 PCT