Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01916 ATGCGTACGTCGATATACGCAGAGTACATCCCAATTTGTACTAGTAGAGCGCCCTCTCTTTCACCCTCCATCGTTTCTTCTTCCGTTACATCTACACACCTTCTCCTTCGCTCTTCCTTTATCTTCTCCCACATGTTCTGGAAGCTCGCCTCTATCTCCTCCTCCTCTCCTGTGGAGGTAATATTGGACAAGGAGAACTTCACTTTGGAAGAACTTCTGGATGAGGAGGAAATAATCCAAGAATGCAAGGCCTTAAACAGTCGACTCATCAACTTTCTGAGAGATAGAACTCAGGTGGAGCAATTGCTACGCTACATCATTGAAGAACCACCGGAGGATGCCGAAAACAAACGGGTCTTCAAGTTCCCATTCATAGCCTGTGAGATCTTTACGTGTGAAATTGATGTAATTTTGAAGACCTTGGTGGATGAAGAAGAGCTCATGAACTTATTATTTTCCTTCTTGGCACCTGATCGTTCTCATAGTACCTTGCTTGCTGGTTACTTTAGCAAGGTCGTTATTTGTCTAATGATACGAAAGACAGTACCGCTTATGAATTATGTTCAAGCCCATCAGCATGTTTTCCGCCAACTTGTAGATTTGATAGGCATTACATCTATTATGGAGGTTTTGGTTCGATTAGTAGGTGCTGATGACCATGTATATCCCAATTTTATAGATGTGATGAAATGGTTGGCTGAGAGCAACCTACTTGAGATGATTGTTGATAAATTAAGTCCAGCTAGTCCTCCCGAAGTTCATGTCAATGTTGCTGAAACTTTGTGTACCATAACTCGAGTTGCATCATCTTCTACTCTAGCAATGAAGCTTTCAAGTCCAAGTTTTGTTGCAAAAATTTTGGGTTATGCATTGGAGGAGTCACATTCGAAGTCTAGCCTTGTCAACTCACTTTCAGTGTGTATTTCTTTGTTGGATCCCAAAAGATCAGCTATTCCGTCTCCGTTTTTTCATTCATTCCGAAGTCAGAACATGTATGAACCACCAATTCCTGTCAACCCAGATACCATTGGTGCAATGCTACCTAAACTTGGTGAACTGCTCGTGCTTTTGGACGTGTCATCCGACAATAAAGTATTGCCTACAACATATGGTGAATTGAGACCTCCACTTGGCAAGCATCGGTTAAAGATTGTGGAGTTTATTGCTGTACTTTTGAAAACTGGAAATGAAGTGGCAGAAAAAGAATTGGCAAACTCAGGAACCATTCGACGAGTCATTGATCTTTTCTTTGAGTATCCATACAATAACTCATTACACCATCACATAGAAAGCATCATATCATCATGTCTAGAGAGCAAATCTAATGCCATCATTGATCATGTGCTCCGAGATTGTGATTTAGTTGGAAGGTTTATCCAAGCAGATAAAAATTCTATTCTTTCTGCTGAAAGCAATCAGCCCACGGTACCTGCTGCAGGAAAACGGGGAACACGAATAGGAAACATTGGACATATTACACGAATTTTCAACAAACTTGTTCACTTGGCCCATAACCAAAGCCACATTGTGAAATGTCTCCAGGAGAATAGTGAGTGGAATGAGTGGCAAGCTACTGTTCTTCAGCAGCGTAATGTGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGCCCAACTGCATTACAAGATAGAATGAGGGATAGTGATGACGAAGACCTTCATGAAAGAGACTATGATGTTGCAGCTTTAGCAAATAATTTGAGCCAGGCTTTTAGATACAAAATTTATGGAAATGAAGATAATGAAGAGGAACATGGTGTTCTTGATCGAGATGACGAGGATGTCTACTTTGACGATGATTCTGCTGAAGTAGTCATATCATCCCTAAGACTTGGTGATGATCAAGGGAGTAACCTGTTTACAAACTCCAACTGGTTTGCGTTCCAAGATGACAGAATTGGTGATGCACCTGGGGGCACATCATCCTCTGAGATGATGGATGAGATAAAATTGAACTCAGCTTCAAATGGTGGTAGCAACAGTAGTGATGACGAGGTAGTGGTTGGAGAGGATGAAGAATTGGCTGACAGCAAAAACACTGTGAATGGTACATCTAGCTCAAGCACGGACTTCTTTAGTGGATTAACTGGTAGTGATTCCATGAATGGGGGTACCTTAGACTTTGAAAGTGAGAAGACAAGTCCTTCACATGATATGGGATTCTTCAGGTTTGAGGCACCAGACAATGAGGACTTGTTTGGGGATAGATCTTTACCTGATTGGGTGGGATGGGGTGAACCATCAGGTATGCAAAATTCTGGCTCAAGTAGGAATCCCTTTCTGGATCATGACGAGTCTGGTAGTAATTTTCCTATCAAGCCTCAGGTAGACAGTCTTGTTCTGAATTCTCCTTCAAATGGGGAATCTGTACCTCCTTCGAATGGATCGCCAACTACTACAGATTCAATTAATGGGAGCATTGACTCCAGTCCAACAACAGTAGCGGTACCCTCGCTATTTGAAGAGGATGTGGAATTTGTAGGTGTGGAATTAGATGGTACCGAGAAGGCAATGGAACAGGCTTTAAAAGAAGGCACAGTTGGCGAAGCCGGACCATTGAAAAGAAACGTAGTGTCAAAGGTTCCAGAAAAGGAAAATTCTGAAGAAGACGGCAGTCATGCTGTGAAGGACTTCAACGATGCAAATTACTGGAGGGTCGACAAAGAGGTTGCTGTTCTAGAGTGA 2703 0.4225 MRTSIYAEYIPICTSRAPSLSPSIVSSSVTSTHLLLRSSFIFSHMFWKLASISSSSPVEVILDKENFTLEELLDEEEIIQECKALNSRLINFLRDRTQVEQLLRYIIEEPPEDAENKRVFKFPFIACEIFTCEIDVILKTLVDEEELMNLLFSFLAPDRSHSTLLAGYFSKVVICLMIRKTVPLMNYVQAHQHVFRQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVMKWLAESNLLEMIVDKLSPASPPEVHVNVAETLCTITRVASSSTLAMKLSSPSFVAKILGYALEESHSKSSLVNSLSVCISLLDPKRSAIPSPFFHSFRSQNMYEPPIPVNPDTIGAMLPKLGELLVLLDVSSDNKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAEKELANSGTIRRVIDLFFEYPYNNSLHHHIESIISSCLESKSNAIIDHVLRDCDLVGRFIQADKNSILSAESNQPTVPAAGKRGTRIGNIGHITRIFNKLVHLAHNQSHIVKCLQENSEWNEWQATVLQQRNVVENVHRWACGRPTALQDRMRDSDDEDLHERDYDVAALANNLSQAFRYKIYGNEDNEEEHGVLDRDDEDVYFDDDSAEVVISSLRLGDDQGSNLFTNSNWFAFQDDRIGDAPGGTSSSEMMDEIKLNSASNGGSNSSDDEVVVGEDEELADSKNTVNGTSSSSTDFFSGLTGSDSMNGGTLDFESEKTSPSHDMGFFRFEAPDNEDLFGDRSLPDWVGWGEPSGMQNSGSSRNPFLDHDESGSNFPIKPQVDSLVLNSPSNGESVPPSNGSPTTTDSINGSIDSSPTTVAVPSLFEEDVEFVGVELDGTEKAMEQALKEGTVGEAGPLKRNVVSKVPEKENSEEDGSHAVKDFNDANYWRVDKEVAVLE 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01916 900 MobiDBLite consensus disorder prediction 777 819 - -
Vimu5g01916 900 MobiDBLite consensus disorder prediction 657 721 - -
Vimu5g01916 900 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 45 871 IPR007587 GO:0019903|GO:0043666
Vimu5g01916 900 MobiDBLite consensus disorder prediction 749 819 - -
Vimu5g01916 900 MobiDBLite consensus disorder prediction 754 769 - -
Vimu5g01916 900 MobiDBLite consensus disorder prediction 684 716 - -
Vimu5g01916 900 Pfam SIT4 phosphatase-associated protein 402 535 IPR007587 GO:0019903|GO:0043666
Vimu5g01916 900 Pfam SIT4 phosphatase-associated protein 175 402 IPR007587 GO:0019903|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01916 Vimu-Chr5 31065039 31077043 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01916 K15501 - gmx:100805409 1513.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00635 4 4772190 4780807 Vimu5g01916 5 31065039 31077043 PCT