Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01910 ATGATAGAGAAGACACAGTGTGAGAAAAAAGGAAACATGGAGGGTGAAGAAACTGAGATAAAACAACAATCCAGGTTCAAGAGGATTTGTGTCTTCTGCGGAAGTAGCCCTGGGAACAAGACTGGCTATAAGGATGCTGCTATTGAGCTTGGGAAAGAGCTGGTGTCAAGAAATATTGATCTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGCTGGTTTCCCAGGCTGTTTATGACGGGGGTCGCCATGTGATAGGGGTTATTCCCAAGACACTGATGCCAAGAGAGATCACTGGAGAGACAGTGGGGGAAGTGATGGCAGTAGCAGACATGCATCAAAGAAAAGCAGAGATGGCTCGCCACTCTGATGCCTTTATTGCCTTACCCGGTGGCTATGGAACACTTGAGGAGCTTCTTGAGGTCATAACTTGGGCTCAGCTTGGCATCCATGATAAACCAGTGGGGTTGCTGAATGTAGATGGATACTACAATTCCTTGTTGTCTTTCATTGACAAAGCTGTGGAGGAAGGCTTCATCAGCCCCAAAGCTCGCCACATAATTGTATCTTCCCCATCATCAAAAGAGCTTGTAAAAAAGATGGAGGAATATTTTCCACAGCATGAAAGAGTTGCCTCTAAGCTGAGCTGGGAAACTGAGCAGATAGATTACTCCTCAAGTTGTGACATGTCTAGGTGA 699 0.4607 MIEKTQCEKKGNMEGEETEIKQQSRFKRICVFCGSSPGNKTGYKDAAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMPREITGETVGEVMAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPKARHIIVSSPSSKELVKKMEEYFPQHERVASKLSWETEQIDYSSSCDMSR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01910 232 MobiDBLite consensus disorder prediction 1 20 - -
Vimu5g01910 232 FunFam CASP-like protein 16 203 - -
Vimu5g01910 232 Gene3D - 15 203 - -
Vimu5g01910 232 PANTHER LOG FAMILY PROTEIN YJL055W 19 227 - -
Vimu5g01910 232 NCBIfam Rossman fold protein, TIGR00730 family 27 204 IPR005269 GO:0009691|GO:0016787
Vimu5g01910 232 Pfam Possible lysine decarboxylase 71 201 IPR031100 -
Vimu5g01910 232 SUPERFAMILY MCP/YpsA-like 25 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01910 Vimu-Chr5 30994055 30997528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01910 K22522 - gmx:100815735 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00643 4 4861322 4866041 Vimu5g01910 5 30994055 30997528 PCT