Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01855 ATGAAATTGCAGTACTATGACATTCGAAAGAAATGTGTGGGACGTTTATGCTATGACTTCAGCAATGTGGAGAAGTTGTTAAACGAGGAGAAAGTGAAGAGTGCTTTAGGTGTGAGGAAGGATTTCAAGTATGCTGGATGCAGTGGGGAAGTGTATGACGCTATGCAGCAAGACATGATGAAAAATCTAGAAGTGTTGCTTCCTGGTCTTCTTGAGGATGGGATAAAGATGCTTGTGTATAATGGGGAAAAAGATCTGATATGCAATTGGCTTGGTAAGCCTACTGGATTCATACGAAGAAAATTGGTTTTGTATCGAAAAAGCTAA 327 0.3976 MKLQYYDIRKKCVGRLCYDFSNVEKLLNEEKVKSALGVRKDFKYAGCSGEVYDAMQQDMMKNLEVLLPGLLEDGIKMLVYNGEKDLICNWLGKPTGFIRRKLVLYRKS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01855 108 SUPERFAMILY alpha/beta-Hydrolases 3 92 IPR029058 -
Vimu5g01855 108 Gene3D alpha/beta hydrolase 3 93 IPR029058 -
Vimu5g01855 108 Pfam Serine carboxypeptidase 10 93 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01855 Vimu-Chr5 30423998 30424324 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01855 K16298 - gmx:100806118 136.346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01855 5 30423998 30424324 Vimu4g00683 4 5263235 5266601 PCT