Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01844 ATGGACAACCAACGTAGTCCTCTTCTCAGTTGGGCTTACTACTGCCACGGAAAGTCAGTGGAGGAGCTGAAGCAGTCGCTGATGTGCACGACTCTTGAGCTGGAACAAACGAGAGCGAGTGTGCAAGAGGAGCTCAGAAAGAAGGACGATCAGCTTCTCACCCTGAAGGAGCTTCTGCATAAGGTGATGAGAGAAAGAGATGAGGCACAAGAGAAATGGCAGAGACTGGTAGTGGAGAAAATGGTTTTCCAGCAGCAAAAGAGGCAGCAGCAGCAGCAGCAAACGGCCCCTGCTTCTGGGATTTCGAGCATTGAAGATGAGCCCAGGAGAGGGATTGACTCCAACAATGGGCTGTCGTCATCGGATTGTGAAGAAAGCATTGTTTCCTCTCCGATCATGGAGCATTTGGGTGGTGGGCAGGCACAGTTGCCAGAGTCAATGATTGAGCTTATATCACCAGATAAACCGTTGCCAGAAAAAGGTAAGCTTTTGCAGGCAGTGATGAAAGCAGGTCCTCTGCTTCAGACTCTGCTCCTGGCGGGACCACTCCCTCAATGGAGACACCCTCCACCCGCTCTTGAGTCCTTCGAGATTCCTCCTGTCACCATTCCTTCCCCACAGGCACAGGCACAGGCACAGGCGCAAACACAAGCGCAAGCACAATTCCTCCACCAAGACTCCTTCACCTCCAACTGCGGGAGAGTGAGTAGGAAAAGGGTTTTCTGTGAGGGCTCTGATTCTCCCACGCAGACCAAGTTCCAAAGGATTGTACTTCACTGA 780 0.5192 MDNQRSPLLSWAYYCHGKSVEELKQSLMCTTLELEQTRASVQEELRKKDDQLLTLKELLHKVMRERDEAQEKWQRLVVEKMVFQQQKRQQQQQQTAPASGISSIEDEPRRGIDSNNGLSSSDCEESIVSSPIMEHLGGGQAQLPESMIELISPDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPALESFEIPPVTIPSPQAQAQAQAQTQAQAQFLHQDSFTSNCGRVSRKRVFCEGSDSPTQTKFQRIVLH 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01844 259 MobiDBLite consensus disorder prediction 88 125 - -
Vimu5g01844 259 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 11 256 IPR012862 -
Vimu5g01844 259 Pfam Protein of unknown function (DUF1635) 18 256 IPR012862 -
Vimu5g01844 259 Coils Coil 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01844 Vimu-Chr5 30311260 30312138 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01844 - - gmx:100782615 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00688 4 5315166 5316124 Vimu5g01844 5 30311260 30312138 PCT