Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00688 ATGGACAACCAGCGTAGTAGCCCTCTTATAACTTGGGCTTACTACTTCCAGGGAAAGTCAATGGAGGAGCTGAGGCAGTCTCTCATATGCACAACTGTGGAGCTTGAACAGACAAGGGCTGCAGTGCAAGAAGAGCTCAGAAAGAGAGATGAACAACTACTCAACCTAAAGGAACTCCTCGGCAAAACCGTGAGAGAGAGAGATGAAGCGCAAGAGAAATGCCGGAGACTACTCTTGGAGAAGATAGTTTTCCAACACCAACAACAAGCAGCTCCTGTGTCTGGAATTTCTAGCATTGAGGATGAGCCAAGAAGAGGAATTGACTCCAACAATGGCCTCTCCTCATCAGATTGTGAAGAGAGCATTGTTTCCTCTCCTGTCATTGACCATCTGTCTCAACATCAACCCCAGTTACAACCACAGTTACCACAATCCATGATTGAGCTAACACCAGACAAACCATTACCAGAAAAGGGTAAGCTCTTGCAAGCAGTCATGAAAGCCGGTCCTCTCCTTCAGACCCTTCTCCTTGCAGGACCTCTTCCCCAATGGAGACACCCTCCTCCACCACTTGAGTCCTTCGAGATTCCCCCTGTCACCATACCTTCACCACTCCCACAATCACAACCACAACCACAACCACAACCACAACTCCTCCACCATGATTCCTTTCTTAACACTGACGGTAGTAGCACCACATCCAACTGCGGAAGGGTTAGTCGAAAAAGGGTCTTCTGTGATGGCTCTGATTCTCCCACCGAGACCAAGTACCAAAGGCTTGTACTTCACTGA 792 0.4836 MDNQRSSPLITWAYYFQGKSMEELRQSLICTTVELEQTRAAVQEELRKRDEQLLNLKELLGKTVRERDEAQEKCRRLLLEKIVFQHQQQAAPVSGISSIEDEPRRGIDSNNGLSSSDCEESIVSSPVIDHLSQHQPQLQPQLPQSMIELTPDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPPLESFEIPPVTIPSPLPQSQPQPQPQPQLLHHDSFLNTDGSSTTSNCGRVSRKRVFCDGSDSPTETKYQRLVLH 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00688 263 Coils Coil 39 80 - -
Vimu4g00688 263 MobiDBLite consensus disorder prediction 188 213 - -
Vimu4g00688 263 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 11 260 IPR012862 -
Vimu4g00688 263 MobiDBLite consensus disorder prediction 214 237 - -
Vimu4g00688 263 MobiDBLite consensus disorder prediction 188 237 - -
Vimu4g00688 263 Pfam Protein of unknown function (DUF1635) 19 260 IPR012862 -
Vimu4g00688 263 MobiDBLite consensus disorder prediction 93 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00688 Vimu-Chr4 5315166 5316124 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00688 - - gmx:100806513 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00688 4 5315166 5316124 Vimu4g00688 4 5315166 5316124 ECH
Vimu4g00688 4 5315166 5316124 Vimu5g01844 5 30311260 30312138 PCT