Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01789 ATGTCCAATTCTGATTCTAACAACCGTAACAGCCTGGCTCCGTCGCCGCCGGAGCCAAAGCCAATGCCGCCTTCTTCCTGGGCCAAGAAAACAGGTTTCAGGCCCAAATTCTCCGGCGAGACCAATGCCACCGATTCGGGCCCGATAACCATCCCTACGCCCAACGTCGATATTGAGGCCGGTCGCGTTCGAACTCCGGCAACTACTAACGGCGTCGCACAAGGCGACAAGCCTCCCGTTCCGGTTCCGCCTCGGCCTTCCATGGCAAAGAAGCGGGGAGACTCAGACGGCGTGCCGAAGAATTCGGTTCCGAGCACCAACGGACAGGCGGCGGGGGCGGAGCAGCCGCCGAGGAGAAATTCGAGGCACGAAGAAGTAGTGGACGGCTTGCCGGTGGAGGTCGACGAGTTCGTGTCAAGGCACGCTCATATGAAGTACGAGCTCAGAGATTCACCTGGTTTAGTTCCTATTGGCGTATACGGTGTTCAACACTACCTTTCGATGTTAGGTTCGTTGGTTCTGATTCCGCTTGTGATTGTTCCTGCCATGGGAGGCACTCATGAGGAAACTTCTATGGTGGTATCGACCGTGCTCTTTGTCTCGGGGGTGACTACTCTCTTGCATGTTGCTTTTGGCTCCAGGTTACCCTTGATTCAGGGCCCTTCTTTTGTCTATCTGGCGCCAGCGCTCGCCATAATCAACTCCCCGGAGTTTCAAGGATTGAATGGAAATGTTTGTATCTTTACCCTTTCGTTTTATCTTTCAGAATCTAGGAATTTTATTCCCTGCAATCATGAACTCCGATTTTTGATGCTGGATGAAGTTTATATGATTCACATTTTTACTTACAAGATCAAATATGAGCTGTCTGATTTTCGTTCAATAAACAACAGGAAATCTGATTCCCAGAAGATATCGATTGCTGTCTGTTTATTTCTTTATTTGCAGAAATTCAAGCATATAATGAAGGAGCTCCAGGGGGCTATAATTATTGGTTCAGCTTTTCAAGCTTTACTTGGATATACTGGACTTATGTCACTGTTAGTAAGGTTGATAAATCCTGTAGTTGTAGCCCCAACTATTGCTGCTGTTGGACTTTCATTTTACAGTTATGGTTTCCCATTAGTTGGTACATGTATTGAGATCGGTGCAGTTCAAATATTAGTGGCTATTGTTTTTTCTCTTTATCTTCGTAAGATATCTGTTCTTGGGCATCGCATATTTCTAATTTATGCAGTTCCTCTGGGACTGGCAATTACATGGGCATTTGCTTTCTTGCTGACTGAAGCCGGAGTTTACAGCTACAAAGGGTGCGATATAAATATACCTGCCTCAAATATGGTTTCAGAGCATTGCAGAAAACATTTTTCAAGGATGAGGCGTTGTCGGGTTGATACATCTCAAGCATTGTTATCCTCTCCATGGTTTAGGTTTCCTTATCCATTACAATGGGGTACCCCTGTCTTCCATTGGAAAATGGCTCTTGTAATGTGTGTGGTTTCCTTAATCTCATCAGTAGATTCGGTTGGCACATACCATGCATCTTCGTTATTGGTTGCATCCAGACCACCGACTACAGGAGTTCTTAGTCGAGGAATTGGCATTGAAGGTCTTTCTAGTGTCTTGGCTGGTCTGTGGGGAACTGGAACCGGATCTATAACTTTAACTGAAAATGTTCACACAATTGCTGTGACTAAAATGGGAAGCCGCCGGGCAGTTCAACTGGGTGCATGCTTTCTGATAGTGTTGTCTCTTGTGGGTAAGGTTGGAGGATTCATTGCTTCAATACCTGAAGTTATGGTTGCGGGTCTCCTCTGCTTCATGTGGGCAATGCTCACTGCATTAGGCTTGTCAAATCTACGGTATAGTGAGGCTGGAAGCTCTCGCAATATCATCATAGTTGGGCTATCACTGTTTTTCTCTCTTTCAATACCTGCATACTTTCAACAATATGGCATCTCTCCAAATTCCAACCTGTCTGTGCCAAATTACTTTCAGCCCTACATTGTGACTTCTCACGGGCCTATCCACAGCAAATATGGAGGGTTGAATTATGTGTTAAACACGCTTTTTTCGCTACACATGGTGATAGCCTTTCTTGTGGCTGTTATTCTGGATAATACCGTACCTGGCAGTAAGGTGGAACGTGGGGTATATGTTTGGTCCGAAGCTGAGGTTGCTAGAAGAGAACTTGCTGTTGCTAATGACTATGAGTTGCCCTTCAGAATTGGTCGGATTTTTCGATGGGTCAAGTGGGTTGGCCTGTAA 2268 0.4586 MSNSDSNNRNSLAPSPPEPKPMPPSSWAKKTGFRPKFSGETNATDSGPITIPTPNVDIEAGRVRTPATTNGVAQGDKPPVPVPPRPSMAKKRGDSDGVPKNSVPSTNGQAAGAEQPPRRNSRHEEVVDGLPVEVDEFVSRHAHMKYELRDSPGLVPIGVYGVQHYLSMLGSLVLIPLVIVPAMGGTHEETSMVVSTVLFVSGVTTLLHVAFGSRLPLIQGPSFVYLAPALAIINSPEFQGLNGNVCIFTLSFYLSESRNFIPCNHELRFLMLDEVYMIHIFTYKIKYELSDFRSINNRKSDSQKISIAVCLFLYLQKFKHIMKELQGAIIIGSAFQALLGYTGLMSLLVRLINPVVVAPTIAAVGLSFYSYGFPLVGTCIEIGAVQILVAIVFSLYLRKISVLGHRIFLIYAVPLGLAITWAFAFLLTEAGVYSYKGCDINIPASNMVSEHCRKHFSRMRRCRVDTSQALLSSPWFRFPYPLQWGTPVFHWKMALVMCVVSLISSVDSVGTYHASSLLVASRPPTTGVLSRGIGIEGLSSVLAGLWGTGTGSITLTENVHTIAVTKMGSRRAVQLGACFLIVLSLVGKVGGFIASIPEVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNSNLSVPNYFQPYIVTSHGPIHSKYGGLNYVLNTLFSLHMVIAFLVAVILDNTVPGSKVERGVYVWSEAEVARRELAVANDYELPFRIGRIFRWVKWVGL 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01789 755 MobiDBLite consensus disorder prediction 1 125 - -
Vimu5g01789 755 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 137 747 - -
Vimu5g01789 755 Pfam Permease family 312 648 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vimu5g01789 755 Pfam Permease family 159 232 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vimu5g01789 755 MobiDBLite consensus disorder prediction 99 114 - -
Vimu5g01789 755 MobiDBLite consensus disorder prediction 37 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01789 Vimu-Chr5 29669377 29680737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01789 316 755 Organic Solute Cotransporters AT2G27810 76.509 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01789 - - zju:107410288 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00736 4 5770862 5777462 Vimu5g01789 5 29669377 29680737 PCT