Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00736 ATGCCCGATTCCGATCCCAAAGCGCCACAGCGACCGGGGCCGTGGCCACCGGCGCCGTTGCCGGACGCCAAGGCAATGCCGCCTTCTACCTGGGCCAAGAAAACGGGCTTCAGGCCCAAGTTTTCGGGCGAGGCCAATGCCAGCGACTCGGGTCAGATAAGCCTCCAGCCCAAGCCCAAGGAGCCCGACACTAACGTGGATCTCGAAGCAGGTCGGGCCCCGGCCCCGACGCCGGCCAACGGCGTGGCTCACCACGACAAGGTCCCGCCGCTTCCTCCTCCCAAGGATCATGTCGTGAAGAAGCGCAGAGACTCTGACGGAGTCCCCAAGAGTTCCGTTTCCAGCATCAATGGCCAGGCGCCACCGCCTCCGCCACCTCCTCCGCCGGGGCGGCGGGCTGCGAGTCACGAGGACATTGTGGACGACGATGGTTTCGTGTCGAGGAATTCGCATATGAAGTATGAGCTCAGAGATTCACCTGGTTTAGTTCCCATTGGGGTGTACGGCATTCAGCATTACGTTTCGATATTGGGTTCGTTGATTCTCATTCCGCTTGTTATGGTTCCGGCGATGGGAGGCTCTCGCGAGGATACTTCTGCTGTGGTGTCGACGGTGCTCTTTGTGTCAGGAATGACTACACTGTTGCATACAAATTTTGGGTCGAGGTTGCCCTTGATACAGGGGCCTTCTTTTGTATATCTGGCTCCGGCCTTAGCGATCATCAACTCCTCCGAGTTTCAAGGATTAAATGAAAATATTATGTTTCTGTTGTTGGTTGTTTGTGAGATGTCATGGGCTTTTGAATGTGTGTATTGTGAGCCTTTTGGTAGAGTAACTGAAACTAAGACTGCTGAGGAATTATTGTGTCAATTTTCAGAAATTCAAACATATAATGAAGGAGCTGCAGGGGGCTATAATCATTGGATCGGCTTTTCAAACATTCCTTGGATATACCGGACTTATGTCACTGTTAATAAGCTGTATTTGCCTCCTATTTTGGCAAGTATAGTGTTAGAGTTGTCTGAAATGAATGTACTAAGGGTCGTATCTGAATTTTCAGTTGGACTTTCATTTTACAGTTATGGTTTTCCGATAGTTGGCACGTGTCTGGAGATTGGTGCAGTGCAGATATTAGTGGTTATTGTGTTTTCTCTTTATCTTCGTAAAATATCTGTTTTTGGGCACCGCATATTTCTAATATATGCAGTTCCTTTGGGTCTCGCAATCACATGGGCAGTTGCTTTCTTGCTGACTGAAGCTGGAGTCTACAACTATAATGGGTGTGACATAAATATACCCTCCTCAAATATGGTTTCTGAGCACTGCAGAAAGCATGTCTCAAAAATGAAGCATTGTCGAGTTGATACTTCTTATGCATTGGAATCATCCCCATGGTTTAAATTTCCGTATCCGTTACAATGGGGTACTCCTGTCTTCCATTGGAAAATGGCTCTTGTGATGTGCGTGGTTTCCTTGATCTCATCTGTTGATTCGGTTGGTTCATATCATGCATCTTCTTTATTGGTAGCATCTCGTCCTCCGACTCCTGGAGTTCTTAGTCGAGGAATTGGTTTAGAGGGTCTTTCTAGTGTCTTGGCTGGTCTTTGGGGAACTGGAACAGGGTCTACCACCTTAACTGAAAATGTTCATACCATTGCCGTCACTAAAATGGGAAGCCGCAGAGCAGTTCAATTGGGTGCATGCTTCCTGATACTGTTGTCGCTTGTGGGTAAGGTGGGAGGGTTCATTGCTTCAATTCCTGAAGTCATGGTCGCTGGTCTGTTATGCTTTATGTGGGCTATGCTTACAGCTTTGGGCTTGTCAAATCTTCGCTATAGTGAGGCTGGAAGCTCTCGCAACATCATCATAATTGGGTTATCACTGTTTTTCTCTCTTTCCGTACCTGCCTACTTTCAACAATACGGCATCTCCCCACATTCCAACTCGTCAGTGCCCAGTTACTTTCAACCTTACATTGTGGCTTCTCATGGGCCTTTCCGCACCCAATATGGAGGGTTAAACTATTTCCTGAACACAACCTTTTCACTACACATGGTAGTAGCTTTTCTTGTTGCTGTCATCTTGGATAATACCGTGCCTGGCAGTAAGCAAGAACGTGGAGTATACGTCTGGTCTGAAACTGAAGTTGCTAGAAGGGAGCCTGCTGTTGCTAATGACTACGAGTTACCTTTGAGAGTTGGTCGGATCTTCAGATGGGTGAAGTGGGTTGGCCTGTAA 2238 0.4786 MPDSDPKAPQRPGPWPPAPLPDAKAMPPSTWAKKTGFRPKFSGEANASDSGQISLQPKPKEPDTNVDLEAGRAPAPTPANGVAHHDKVPPLPPPKDHVVKKRRDSDGVPKSSVSSINGQAPPPPPPPPPGRRAASHEDIVDDDGFVSRNSHMKYELRDSPGLVPIGVYGIQHYVSILGSLILIPLVMVPAMGGSREDTSAVVSTVLFVSGMTTLLHTNFGSRLPLIQGPSFVYLAPALAIINSSEFQGLNENIMFLLLVVCEMSWAFECVYCEPFGRVTETKTAEELLCQFSEIQTYNEGAAGGYNHWIGFSNIPWIYRTYVTVNKLYLPPILASIVLELSEMNVLRVVSEFSVGLSFYSYGFPIVGTCLEIGAVQILVVIVFSLYLRKISVFGHRIFLIYAVPLGLAITWAVAFLLTEAGVYNYNGCDINIPSSNMVSEHCRKHVSKMKHCRVDTSYALESSPWFKFPYPLQWGTPVFHWKMALVMCVVSLISSVDSVGSYHASSLLVASRPPTPGVLSRGIGLEGLSSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVQLGACFLILLSLVGKVGGFIASIPEVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIIGLSLFFSLSVPAYFQQYGISPHSNSSVPSYFQPYIVASHGPFRTQYGGLNYFLNTTFSLHMVVAFLVAVILDNTVPGSKQERGVYVWSETEVARREPAVANDYELPLRVGRIFRWVKWVGL 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00736 745 MobiDBLite consensus disorder prediction 118 132 - -
Vimu4g00736 745 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 145 737 - -
Vimu4g00736 745 MobiDBLite consensus disorder prediction 45 59 - -
Vimu4g00736 745 MobiDBLite consensus disorder prediction 89 108 - -
Vimu4g00736 745 Pfam Permease family 167 243 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vimu4g00736 745 Pfam Permease family 378 638 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vimu4g00736 745 MobiDBLite consensus disorder prediction 1 24 - -
Vimu4g00736 745 MobiDBLite consensus disorder prediction 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00736 Vimu-Chr4 5770862 5777462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00736 355 745 Organic Solute Cotransporters AT2G27810 75.904 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00736 - - gmx:100780211 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00736 4 5770862 5777462 Vimu4g00736 4 5770862 5777462 ECH
Vimu4g00736 4 5770862 5777462 Vimu5g01789 5 29669377 29680737 PCT