Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01786 GAAGGGTTGTTCAAGTCACCGGTTTTGTGCGTGTGCATAGACAAGAAGACCGTGATTCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGGAATCAGACGATTTTCGTTGATGGGTTGCTGGTTGATTTGCTTTGGGATGTTCATGACTGGTTTTTCACCCCTTCTTCTTCTTCATCTTCTTCTGGGTATGCAGTGTTTATGTTCAGAACTAGGAGTGGCATGGATAGCAGGTTGTGGTTGGAGGAAAAGAATGCACAAAAAGATAAAGACAGGGTTGAATTCTCCTTGTTGATCTATGCATGTAAGACTACATAA 315 0.4349 EGLFKSPVLCVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFTPSSSSSSSGYAVFMFRTRSGMDSRLWLEEKNAQKDKDRVEFSLLIYACKTT 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01786 104 Pfam Plant protein of unknown function (DUF868) 5 102 IPR008586 -
Vimu5g01786 104 PANTHER EXPRESSED PROTEIN 6 102 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01786 Vimu-Chr5 29631442 29631802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01786 7 100 EF-hand Containing Proteins AT3G04860 42.553 8.48e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01786 - - gmx:100794621 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00743 4 5804908 5805810 Vimu5g01786 5 29631442 29631802 PCT