Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00743 ATGAATATGGCGGATATAATATCTTGCTTCAATGAGAACGCAGTGAATGTGTCACACTCTTCGTGTTCTAGCTACTCAAACAACGCCTGCATATCTCCCAGTGTTACACCTTCAACGCAGAACTCGGTGACCTCTGTCTACAAAACCACCCTCTCCAACCAAAAGCAGGTTCTGATCACGGTCACGTGGTGCAAGAGCCACTCCAACCAAGGACTCACCATAACCTTCGGCGAAGAGAACCCTTTGGAACCATCTTTCAGGCTCAACACAAATTCGCGGTTTTTCAGGAAAAAGAAAGGAAGCAAGGTCCTAGAATCCCAAGACTCCAAGGTTGAAGTCTTCTGGGACCTGTCGAAGGCCAAGTACGACACTGGTCCCGAACCTGTTGAAGGGTTTTACGTGGCGATTCTGGTTGATGCTGAGATAGGCCTCGTTCTTGGAGAAGAAGATGTGGTGAAGAAGTTCAAAACGAGAACCCTTTTGGCCAAAGTTTCGCTTTTGTCACGGCGTGAACATTGCTCCGGGAACGCCGTTTACGCCACCAAGGCTCAGTTCTGTGACAGCGGAACTTGGCATGACATTTTGATCCGATGCAGTGGGGAGAATGAGGGCCTGAAAGCTCCTGTTTTGTCCGTTTGCATTGACAAGAAAACGGTGATCCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGCAACCAAACGATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAACCCTGCTTCTGGTTATGCAGTGTTCATGTTCAGGACCAGAAGTGGCTTGGATAGCAGATTGTGGTTAGAGGAAAAGATTGCACAGAAAGACAAAGACAGAGTTGAATTCTCCTTGTTGATCTATGCATGTAAGAGCACATGA 903 0.4729 MNMADIISCFNENAVNVSHSSCSSYSNNACISPSVTPSTQNSVTSVYKTTLSNQKQVLITVTWCKSHSNQGLTITFGEENPLEPSFRLNTNSRFFRKKKGSKVLESQDSKVEVFWDLSKAKYDTGPEPVEGFYVAILVDAEIGLVLGEEDVVKKFKTRTLLAKVSLLSRREHCSGNAVYATKAQFCDSGTWHDILIRCSGENEGLKAPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGYAVFMFRTRSGLDSRLWLEEKIAQKDKDRVEFSLLIYACKST 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00743 300 PANTHER EXPRESSED PROTEIN 6 298 IPR008586 -
Vimu4g00743 300 Pfam Plant protein of unknown function (DUF868) 38 298 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00743 Vimu-Chr4 5804908 5805810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00743 3 299 EF-hand Containing Proteins AT5G28150 39.274 1.17e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00743 - - gmx:100798692 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00743 4 5804908 5805810 Vimu4g00743 4 5804908 5805810 ECH
Vimu4g00743 4 5804908 5805810 Vimu5g01786 5 29631442 29631802 PCT