Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01781 GTTTTCTGCATATATATGTGGCTCCTAGGAGCTATACTTTTGGTTCATAATTCTTGTGTTGCAGCTATGGGATCTTTTAATCACTATGTGATTGTTAAGTTCAAGGATGGTGTGGAAGTTGAAGAACTCATTCAAGGGTTGGAGAAGATGGTATCAGGAATTGATCAAGTCAAATCCTTTGAATGGGGAAAGGACATAGAAAGCCATGAAATGCTAAGACAAGGTTTCACTCATGTTTTCTTGATGGCATTCAATGGAAAAGAGGAATTCAATGCATTTCAGACTCATCCCAATCATGTTGAGTTCTCAGGAGTGTTTTCACCAGCTATTGAGAAGATTGTGGTGCTGGATTTTCCATCTAAGCTTGTCAAAGCACCAGCATGA 384 0.3906 VFCIYMWLLGAILLVHNSCVAAMGSFNHYVIVKFKDGVEVEELIQGLEKMVSGIDQVKSFEWGKDIESHEMLRQGFTHVFLMAFNGKEEFNAFQTHPNHVEFSGVFSPAIEKIVVLDFPSKLVKAPA 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01781 127 SMART Dabb_2 26 120 IPR013097 -
Vimu5g01781 127 PANTHER - 24 121 IPR044662 -
Vimu5g01781 127 ProSiteProfiles Stress-response A/B barrel domain profile. 26 118 IPR013097 -
Vimu5g01781 127 Pfam Stress responsive A/B Barrel Domain 27 119 IPR013097 -
Vimu5g01781 127 Gene3D - 22 127 - -
Vimu5g01781 127 SUPERFAMILY Dimeric alpha+beta barrel 23 119 IPR011008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01781 Vimu-Chr5 29566461 29567106 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01781 - - vra:106755810 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00748 4 5868816 5869462 Vimu5g01781 5 29566461 29567106 PCT