Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01711 TTGCGGTTTTTGCCGGGAATGAGTTTTTATAGGCCAAATCTGCAAACTTCAAAGTTACGACTCTGGCACTGCAGGAATCAGAATTTTTGTTTCGTCTTTTCGAGAAAATTCGTCTTCCGTATTCTTGAACTGAAACCGTGTTCAGATTTTTCCTTGTGGTTTGAAGTCGAGGCGATGAGACGAATTCAGCTTCCGGAGCCGCCGAGCCCTACCGCCCGGAGAGGAACTCCGGACATATTCGAGTCCGGAGTTCACACGTTTGTGCGACGCGCCGTTGTAATCGGCAACGGCTCCGCCGCTTCGGAGAATCAGAGCGTCGGATTGGTTCGTGCCCTTGGCCTCGCCGATAAGCACGTTTTATATCGTGTTACCAGACCAAAAGGGGGAATTAATGATTGGCTTCAATGGCTTCCAGTCTCGCTCCATAAAAAAATAGATTATATAGTAAGAATGATTCAAGGTTATTCTCAGCTTATGTTGAAATCTCAGGAAAAGAAGCTTATGCCTTTACCTTCAGAAAATGGTGTCAGTGCAGGCTTGTTAGCTGTCTTGGAAGCTGATGCAAAGCAGATAGTTAGTTTTGCTCGTGAAACTTATGAGAAGGAGGGACCATTGTTGGTTGTTGCATGTGGAAGGGACACCATTTCTACTGCAAGTTCCATAAAACGCCTAGCATCAGAGAATGTGTTTGTCGTTCAGATACAACATCCAAGATCGATTTTGAATCGCTTTGACATGGTAATTACACCCAAGCATGATTATTATCCTTTGACTCCAGAAGGACAAAAACAGATTCCTCGGTTTCTTCGAAGTTGGATAACTCCGCGTGATCCTCCAGATAGTCATGTGGTTCTTACTATGGGGGCATTACATCAAGTAGATTTCAGTTCAATACGTAGTGCTGCTGCTACTTGGCATGACGAGTTTTCAAATGTTCCGAGGCCCTTGCTTGTGGTCAACCTTGGAGGACCAACAAGGAACTGTCGATATGGTGTAGACCTTGCCAAGCAGTTAGCAGTTTCTTTGCTCAGTGTTCTAGCTAGTTGTGGCAGTGTTAGGATATCCTTTTCGGAGAGGACACCACAGAAGGTGTCCAATATCATAGTAAAAGAACTTGGGAATAACCCAAAAGTTTATATCTGTGATGGGCAAGGACCTGACCTGCACATGGGCCATTTAGCTTGGGCAGACTCATTTGTTGTCACTGCAGATTCAGTTAGCATGATAAGTGAAGCTTGCAGCACTGGGAAGCCTGTTTATGTTATGGGCGTTGAGCGATGCAGATGGAAGTTCAATGAATTTCACAAATCTTTGAGAGAGATGGGAGTTGTTCGTCCTTTTACAGGTTCCGAGGATATATCAGAAAGTTGGAGTTATCCACCCCTTTCCGATACTGCTGATGCCGCCAAAAAGGTTCATGAAGCGCTTGCTGCCCGAGGGTGGAAATTGAAGGTATAG 1458 0.4506 MRFLPGMSFYRPNLQTSKLRLWHCRNQNFCFVFSRKFVFRILELKPCSDFSLWFEVEAMRRIQLPEPPSPTARRGTPDIFESGVHTFVRRAVVIGNGSAASENQSVGLVRALGLADKHVLYRVTRPKGGINDWLQWLPVSLHKKIDYIVRMIQGYSQLMLKSQEKKLMPLPSENGVSAGLLAVLEADAKQIVSFARETYEKEGPLLVVACGRDTISTASSIKRLASENVFVVQIQHPRSILNRFDMVITPKHDYYPLTPEGQKQIPRFLRSWITPRDPPDSHVVLTMGALHQVDFSSIRSAAATWHDEFSNVPRPLLVVNLGGPTRNCRYGVDLAKQLAVSLLSVLASCGSVRISFSERTPQKVSNIIVKELGNNPKVYICDGQGPDLHMGHLAWADSFVVTADSVSMISEACSTGKPVYVMGVERCRWKFNEFHKSLREMGVVRPFTGSEDISESWSYPPLSDTADAAKKVHEALAARGWKLKV 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01711 485 PANTHER OS02G0535700 PROTEIN 59 484 IPR009367 -
Vimu5g01711 485 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 195 424 - -
Vimu5g01711 485 Pfam Mitochondrial fission ELM1 101 476 IPR009367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01711 Vimu-Chr5 28807034 28812178 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01711 - - gmx:100777791 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00794 4 6250328 6254516 Vimu5g01711 5 28807034 28812178 PCT