Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00794 ATGAAGCCAATACGGCTTCCGGAGCCGCCCAGTCCCACGGCGGCGCGTGGCACTCCGGACATCTTCGAATCCGGCGTCCATACTATTGTCCGCCGTGCCGTCGTCATCAGCAACGGCTTCCCTTCCTCCGAGAATAACAGTATCGGTTTGCTCCGCGCTCTCGGATTCTCCCACAACCATCTCCTATACCGCGTTACGAGGCCGAAAGGTGGAATCGACGATTGGCTCCAATGGCTTCCCCTCTCTCTCCATCAAAAATTCCATTACCTATTTTCCTTGTTCCGCGCCTTTTCCTCCAAATCTCAGTACCTTCCCATCACTTCGCACCCTAACGGGTTGTCTTCTATTCTTGAAGCTGATGCGAAACATATAGTCAATTTGGTTCGCGAAACTTACGAAAAGGAGGGACCGTTATTGGTGGTTGCATCTGGACGAGACACGATTTCTGTTGCGAGTTCCATAAAAAGTTTAGCTCCTGACCTTGTTTTTGTTGTTCAGATACAACATCCAAGGTCTCATTTGAACAGGTTTGACATGGTGATTACACCTCATCATGATTATTATCCTCTGACACCAGAAGGACAGAACCAGGTTCCTAGGTTTCTTAGAAGCTGGATAACTCCACGCGAGCCCCCAGATAGTCATGTGGTTCTGACATTGGGAGCCTTACATCGAATAGATTTTGCTTCACTTCGCAGTGCTGCCATTACATGGCAAGATGTGTTTGCTCGTGTTCCAAGGCCGTTGCTCGTGGTCAACATTGGAGGACCAACAAAAAATTGTCCATATGGTGTCGATCTTGCAAAGCAGTTAGTAACATCTCTTCTCAGTGTTCTTGGTAGTTGTGGGAGTGTAAGAATATCCTTTTCAGAAAGAACTCCACAAAAGGTGTCCAATATTATAGTGAAAGAACTTGGAAATAATCCAAAAGTTTATGTTTGGGATGGGCAAGAACCAAACCCGCATATGGGGCATCTGGCTTGGGCGGATGCATTTGTTGTCACTGCAGATTCAGTTAGCATGATAAGTGAAGCTTGCAGTACTGGGAAGCCTGTGTATATTATGGGAGCTGAGCGTTGCAAATGGAAATTCACAGAATTCCATAAATCATTGAGAGAACGAGGAGTTGTTAGGCCGTTTACAGGGTCGGAGGATATATCAGAAAATTGGAGTTATCCACCTCTTGAAGACACAGCGGATGCAGCTAAACGGGTTCATGAAGCGCTTGCTGCCCGAGGATGGAAACTGAAGATATAG 1257 0.4678 MKPIRLPEPPSPTAARGTPDIFESGVHTIVRRAVVISNGFPSSENNSIGLLRALGFSHNHLLYRVTRPKGGIDDWLQWLPLSLHQKFHYLFSLFRAFSSKSQYLPITSHPNGLSSILEADAKHIVNLVRETYEKEGPLLVVASGRDTISVASSIKSLAPDLVFVVQIQHPRSHLNRFDMVITPHHDYYPLTPEGQNQVPRFLRSWITPREPPDSHVVLTLGALHRIDFASLRSAAITWQDVFARVPRPLLVVNIGGPTKNCPYGVDLAKQLVTSLLSVLGSCGSVRISFSERTPQKVSNIIVKELGNNPKVYVWDGQEPNPHMGHLAWADAFVVTADSVSMISEACSTGKPVYIMGAERCKWKFTEFHKSLRERGVVRPFTGSEDISENWSYPPLEDTADAAKRVHEALAARGWKLKI 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00794 418 PANTHER OS02G0535700 PROTEIN 1 417 IPR009367 -
Vimu4g00794 418 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 144 357 - -
Vimu4g00794 418 Pfam Mitochondrial fission ELM1 43 409 IPR009367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00794 Vimu-Chr4 6250328 6254516 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00794 - - gmx:100813086 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00794 4 6250328 6254516 Vimu4g00794 4 6250328 6254516 ECH
Vimu4g00794 4 6250328 6254516 Vimu5g01711 5 28807034 28812178 PCT