Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01706 TTGAAGAAACTGAGAATCTGGAACGCAGCAATCATGCCTGATACTACTTCGCCACCGTCGGAGAAAACCCAAAACACTTCAATCCTCGCCGCGCTCCACTCCGACATCATCCACGCGAACATCCTCACGCGCCTCGACGCCGCCACGCTGGCATCCGCTGCGTCCGTATCCACCCTCATGCACCGCCTCTGCACACAAGAGGATCTCTGGCGCCAAATCTGCACCGCCACGTGGCCGTCCTTGCGCGACCCCATCGCCCGCCGCGTCATCTCCACCATCCCCGGCGGCCACCGCTCCATCTACTCCGATGCCTTCCCTTCCCTCCATCATTTCTCTCTGCATCCCTGCCGCCCGCCACCTCCACCGCCCGAGGAGCTTATCTCCGCCGTGGACATATACTACCAGGGAAGGCCGGTGTTCTCGCGCGTGAAACGCATCGAAACGCAGAAAGACTGGTTCCTCTCCTCGCCGCTGTGGGTGGACGCTCTAGAGCCCAACGAGATGATTCCCACGACGTTGAAGTTCACGAGGAAGGAAGAGAAGTGGTTGAAGCAGTTGGAGGAGAGTCTGAGCGTGAGCTGGATTATGGTGGATCCTACAGGGAAGCGTGCGGCGAACGTTTCGAGCAGGAGGGCGGTATTGGCGCGGCGGCATTGGCTGACACGGGAGGTGGAGGTGTTGTACGCAACGGAGATGGCGAGGGAAAGGGTGCAGTGCGTGGTGAAGGTCACGTGCGGTGGGAAGGTGGGAGGGGAAGTGCACGTGAGGGAGGTGAATCTGGTTATGAAGGACACGGAGGAGCGGCAGCTGAGTGGGAAGGAGGGTGTGGCGATTCTCCAGAGAGGGATGGAGTGTGGAGTGAGGAAGAGATTGGATGATGTGAGGGAGAAGGAGAGGTTTCAGAAGTTCACGTGCTTGATGAAAGAGAGCAGAGAAAAGAAGTTTAGAATGGAGAAGGCACGTGATCTTCTTTCAACACTCTTCGCTTTCCTTGCTTGTCTCTTCTTTTGCTTTCTCGCTGGATTCTGA 1029 0.5763 MKKLRIWNAAIMPDTTSPPSEKTQNTSILAALHSDIIHANILTRLDAATLASAASVSTLMHRLCTQEDLWRQICTATWPSLRDPIARRVISTIPGGHRSIYSDAFPSLHHFSLHPCRPPPPPPEELISAVDIYYQGRPVFSRVKRIETQKDWFLSSPLWVDALEPNEMIPTTLKFTRKEEKWLKQLEESLSVSWIMVDPTGKRAANVSSRRAVLARRHWLTREVEVLYATEMARERVQCVVKVTCGGKVGGEVHVREVNLVMKDTEERQLSGKEGVAILQRGMECGVRKRLDDVREKERFQKFTCLMKESREKKFRMEKARDLLSTLFAFLACLFFCFLAGF 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01706 342 Gene3D - 17 121 - -
Vimu5g01706 342 PANTHER F-BOX PROTEIN-RELATED 23 338 IPR045283 -
Vimu5g01706 342 SUPERFAMILY F-box domain 20 98 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01706 Vimu-Chr5 28755679 28757847 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01706 - - ccaj:109798917 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00801 4 6296587 6297567 Vimu5g01706 5 28755679 28757847 PCT