Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00801 ATGCCACCCATGGACGCCACTTCTTCTTCTGACATCACCACTCTTCACCCCGACATCATTCGATCCCACATCCTTAATCGCCTCGACGGCCCCACCCTCGCCTCCGCATCCTCCGCCACTCTCCACCTCCGCCGTCTCTGCACCGATCACAACCTCTGGCGGACCATCTGCGCCGCCAATTGGCCCTCTCTCAACCAACCCAAAGCCGCTGCCCTCATCGATACCTTCCCCGCCGCCCACCGCTCTGTCTTTTCCGACTCCTTTCCCTCCATCCAATACTCCCCTCCTCCCCACCCCATCACACCGCAGTTGTCGCCGGAGTTTGTATCCGCCGTGGACCTCTACTACAAGGGCAAACCCGTCTTTTCGCGTGTCATAACGACCGAAACCCAGAAGGGTTGGTTCCTCTCGTCCCCGCTCTGGGTGGACCTCCTCGACACCAACGAGGTGGTCCCCACTCCCTTGATATTCGCGAAGTGCGATGAGGAATCTTCGTGGCTGGCACACCTGGAGGAGAATCTGGGGCTGAGCTGGATCGTCATCGACCCGACGCGGAAGCGTGCGGCGAACCTCTCGAGCCGGCGGCCGGTGGCGGCGCGGCGGCACTGGCTGACGGGGGATCTGGAGGTTATTTTCGCGGTGACCATGGAGACGGTCCAGTGGGTTATCAGGGTCACGTGCTGCGGGAAGGCCGGGGGCGCTATGCACGTGAGGGAGGCGAGTCTGACGATGGAGGACACGGAAGGGAGACACGTGACCGGCAGGGACAGCTTCGTGATTTTGCAAGACGCCATGGAGAACGGCGAGCGACGAAAACCCGATCCCGAAGAAGCCAAAGCAAGGTTCGATAAATTCTGCCGCTTGAAGAGAGAGATCAGAGAGAGAAAACTCCGGAGAGACAGTGTAATGGACACGGTTGCCATGTTGGTCTCTTTCACCATTTTCGTTTCCCTCTTTTGGTTCATGGTCTTTGGTTTTTGA 981 0.5912 MPPMDATSSSDITTLHPDIIRSHILNRLDGPTLASASSATLHLRRLCTDHNLWRTICAANWPSLNQPKAAALIDTFPAAHRSVFSDSFPSIQYSPPPHPITPQLSPEFVSAVDLYYKGKPVFSRVITTETQKGWFLSSPLWVDLLDTNEVVPTPLIFAKCDEESSWLAHLEENLGLSWIVIDPTRKRAANLSSRRPVAARRHWLTGDLEVIFAVTMETVQWVIRVTCCGKAGGAMHVREASLTMEDTEGRHVTGRDSFVILQDAMENGERRKPDPEEAKARFDKFCRLKREIRERKLRRDSVMDTVAMLVSFTIFVSLFWFMVFGF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00801 326 PANTHER F-BOX PROTEIN-RELATED 5 320 IPR045283 -
Vimu4g00801 326 SUPERFAMILY F-box domain 9 69 IPR036047 GO:0005515
Vimu4g00801 326 Gene3D - 3 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00801 Vimu-Chr4 6296587 6297567 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00801 - - gmx:100794825 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00801 4 6296587 6297567 Vimu4g00801 4 6296587 6297567 ECH
Vimu4g00801 4 6296587 6297567 Vimu5g01706 5 28755679 28757847 PCT