Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01672 ATGGCATCTCCAAACACAAACCAGGAGAAATCAGGGGTGGTTGGTCGAGTATTGGCCTTGTCAAAAGTTCTTAAGAAGAAGGTGTTGGGAATTTGTAGGTTAACAAAAGAGATAGCCCAAGATGATCCTAGAAAAGTTATTCATTCACTAAAAGTGGGGCTTGCAATCTCACTCGTTTCTCTTTTCTATTACTATCAACCACTATATGAGAATTTTGGTCTATCAGCAATGTGGGCTGTGATGACTGTAGTGGTAGTTTTTGAGTACACAGTCGGAGCCACTCTAGGAAAAGGTTTGAATAGGACAATTGCAACATTGGCAGCTGGTGCTCTTGGTGTTGGTGCTCATTACTTAGCCAGCCTTTCTGGAGCAACAGGGGAACCAATATTGATTGGTGCATTTGTCTTTGTGCAAGCTGCCATAGCATCGTTTATAAGGTTTTTTCCAAAAGTGAAGGCAAGATATGATTATGGGATGCTTATATTCATCTTGACATTCTCTTTGATATCCGTGTCTGGTTTTCGAGAAGTTGAAGTGTTGGAAATGGCACACAAGAGACTGTCAACAATATTTATAGGGGGTTCAGCTTGTGTGATGATTTCCATTTTTGTTTGCCCTGTGTGGGCTGGTGAAGAGTTCCACTATTCCATTGCTCACAAGCTGGAAATACTTGGCGATTTCTTGGAAGCTTTTGTACACGAATACTTCAAACCACAAGAAGGAGAATCTGAAGACAGCAAAGGAGATTCTAAAGACAAATCATTTTTGGAAGGTTATAAAAAGGTTCTCAATTCTAAAAGCATAGATGACTCTTTGGCAAATTTTGCAAAATGGGAGCCAGGTCATGGCAAGTTTAGATTTCGTCATCCTTGGGACCTATACCTCAAGATTGGTGCTCTTTCTCGCCAATGTGCATATCGAATGGAAGCTATAGATGCAAACTTTAATTCAGATATCAAAGGATCCCAGGAGTTTCGTTCCACCATCCAAGAGTTATGCTCAGAAATGAGTTTGGAATCTAGCAAAGCCTTTAAGGAACTAGGATCATCGATTAGAACAATGACTAGGCCTTCTTCTTCAGACACACATGTTGCAAACGCAAAATCTGCAGTGAAGAGTCTGAAGTCATTGCTCCAATCATGTTCAAGGAAAGAAACTGACCTTTTATCACTTATACCAGCTGCAACAGTGGCCTCACTACTGATTGATATTGTGGAAATCACAGATAAAATAGCTGATTCGGTGAACGATCTTGCCACCCTGACAGGTTTTGAGGTTGTAGATACAGATAAATCTCCTAAAGTACCATCACAATCTTCACACTGTGAATGTGATGAACCAGTTTCCAAAACTGATCATCTCCAAGTCGTTATTCTAATTGAGGAGTCAGCACTAGCTGTGTCAGATAGTGAAAAATCAAACGTAGTTTGA 1431 0.4032 MASPNTNQEKSGVVGRVLALSKVLKKKVLGICRLTKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTIATLAAGALGVGAHYLASLSGATGEPILIGAFVFVQAAIASFIRFFPKVKARYDYGMLIFILTFSLISVSGFREVEVLEMAHKRLSTIFIGGSACVMISIFVCPVWAGEEFHYSIAHKLEILGDFLEAFVHEYFKPQEGESEDSKGDSKDKSFLEGYKKVLNSKSIDDSLANFAKWEPGHGKFRFRHPWDLYLKIGALSRQCAYRMEAIDANFNSDIKGSQEFRSTIQELCSEMSLESSKAFKELGSSIRTMTRPSSSDTHVANAKSAVKSLKSLLQSCSRKETDLLSLIPAATVASLLIDIVEITDKIADSVNDLATLTGFEVVDTDKSPKVPSQSSHCECDEPVSKTDHLQVVILIEESALAVSDSEKSNVV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01672 476 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 21 429 - -
Vimu5g01672 476 Pfam Aluminium activated malate transporter 37 419 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01672 Vimu-Chr5 28422298 28424608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01672 26 474 Miscellaneous Gene Families AT2G27240 54.667 1.18e-169 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01672 K25841 - gmx:100813430 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00821 4 6478019 6480349 Vimu5g01672 5 28422298 28424608 PCT