Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01659 ATGTCCTCAAAGAACTTCCTCTCTCAAACCATTGCTCTTTCCGAAGAACTCGTGCATGCCAAAACCATTGAGGGCTCGGAAGATGACGAGAGCAATAACAAGGACCTTGACGATGAAGCTGAAAGAGAGAGGCTCGAGATTTGGAGTTCCATCCAACGGAACAAGAAGGAGGAGCAAGAGAAATCAGGGTCATTTGATACGTGGAGCTCAATCATATCCCTGAAAGGAAAAGATGAAATCTCGAAATCTCTTCCTGCGTCACTTTATGTTCATCCTCTTGTGAAAAGGTCCAAGAGTTGTTTGAGTGAGAAGAGCCTCCAAATCTGCACAGAGAGTCTCGGATCCGAGACTGGCTCTGATGGGTTGTTGTCCTCTTCATATTCTTCTACTGAGACAGGGGATGCAGAGGAACAAGAGAAAGTTGCAGAGCCAACACACCAAGAAGAAGAAGAGTTGAGCAATTATGCATCAGTGGTGGTGGCTACAAAGAAGGCTTCGTCACCAACACCCGGTCCTTCACTTCACATGCGTTCACGCCGTGACAACGGAAGGTTGGTTCTAGAAGCTGTTTCGGTCCCTTCTCACAACAATTTCAGCATTCAGCGTCAAGGTGGTCGCCTTGTCCTCTCTTTCTCCAACCACCAAGAAGAGGACGAGGAGGAAGAAGAAGAAGACGCGGAAGAAGAATACGCTTTTGGGACGAAAGGACACTTATTGTCTAGTGAGGTGACAAGTAATGTTCAAGGGTTGGCTTTGATGACGAATAATAAGAAAAAGACAATCGGGGTAGTGAACAGGAGTCCAAAGTGGTCGGAGAAGTTCGATGAGATGACCAACTTTAATGATGTTAATGTGGCACAATCACTGCCTCCGAGGCCAAGGGTGGCTGCAGCTGCAGCTTCTTTCAATTTCAATGCTTATGAGTACTATTGGAGGACCAAGGACATGAACAAGATGGTCCCAAGGGAGCAACAACAGGTGTTGGTTCTAAGAGGGAAGAATGGTGATTACTTGGTTCATAATTTGAAGAGTTGCAAGGATTCTAGAAGGTCGTTTCTGTTCTGGGAACCCTATTGCATTGCCACCTCTTGA 1092 0.4625 MSSKNFLSQTIALSEELVHAKTIEGSEDDESNNKDLDDEAERERLEIWSSIQRNKKEEQEKSGSFDTWSSIISLKGKDEISKSLPASLYVHPLVKRSKSCLSEKSLQICTESLGSETGSDGLLSSSYSSTETGDAEEQEKVAEPTHQEEEELSNYASVVVATKKASSPTPGPSLHMRSRRDNGRLVLEAVSVPSHNNFSIQRQGGRLVLSFSNHQEEDEEEEEEDAEEEYAFGTKGHLLSSEVTSNVQGLALMTNNKKKTIGVVNRSPKWSEKFDEMTNFNDVNVAQSLPPRPRVAAAAASFNFNAYEYYWRTKDMNKMVPREQQQVLVLRGKNGDYLVHNLKSCKDSRRSFLFWEPYCIATS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01659 363 MobiDBLite consensus disorder prediction 133 150 - -
Vimu5g01659 363 MobiDBLite consensus disorder prediction 113 152 - -
Vimu5g01659 363 MobiDBLite consensus disorder prediction 21 41 - -
Vimu5g01659 363 MobiDBLite consensus disorder prediction 113 132 - -
Vimu5g01659 363 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 38 362 IPR021410 -
Vimu5g01659 363 Pfam Fantastic Four meristem regulator 169 211 IPR046431 -
Vimu5g01659 363 Coils Coil 209 229 - -
Vimu5g01659 363 Coils Coil 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01659 Vimu-Chr5 28187397 28188728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01659 - - vra:106776294 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00830 4 6641512 6642759 Vimu5g01659 5 28187397 28188728 PCT