Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00830 ATGTCAACTTGTACGAACAAGAAAATCCAATTACCTAAGTATCGGAGAATAGACGAAGAGACTCTTCTGATGCAGAAGCAGGGCATTGTCACCATTTTGGGATCTAACAACGATTCTGCCACTTCTTTTCGACGCACTCTATCCGCAGACATGTCTTCCAAGAAATGGCTTTCTCAAAATGGGTTTTCTCCCATGAAAAAGATCTCTTCCGCAGAACAAATCTCTCGCTCATTCACAGAACCCACTGTTGCTGCTGACTCCTCATCTTCGTCAGAAGATGACAACAGCGAACAAATCAAACAGAGACGGTGCCATATTTGGGAGGCGATTCAAAAGAAGGAGAATGTGGAGAAATTGGGAGAGTTAGACATATGGAGTTCGATTTTGTCGAAGAAAGCCGACGAAGAAAGCTCCAAATTAACAATCCCTCCTTACGTTCACCCACTTGTGAAAAGGTCAAAGAGCTGTCTGAGTGAAAAGAGTCTCCAGATATGCACGGAGAGTCTGGGATCCGAAACTGGCTCAGATGGGTTTTCTTCTTATTCACCATCTGAGACAGAGGATTCGGAGGAAGAGAAGGAAGAAAAAGAGAAACATAAAATGGAACTTTCACACGGGGAAGAGTTTCACGTGCCAAAACAAAACCATGCTGTGAAAAGAACTTCTCCTCGTTCTTTTCCTCCGCCACTCCCTTCACTTCACATGCGATCCCACCGCGACAACGGAAGGTTGTTCATACAAGCTGTGTCTGTTCCTTCTCAGAACAATTTTTCTGCTGAACGACAAAATGGTCGTCTTGTCCTCACTTTTGCTGAAATGTCTGAAGAAGAAGCAGAAGAAGAGGCAGAGGAATTTGAGAGTCGTGTGAAGGTGCAAGAAAATGCACCCATGTTGTTGTCTAGTGGGATTGGGTTAGCAGTAATGATGAACAAACCAAGTGGAGTAGGTGATTCTTATACAAGTCCAAAATGGTCGGAGAAGTTCAACGATGTTGTCAATTTTAAGGATGTTGATGTGGCACAACATGGTCCTCTGCCACCAAGGCCAAGGGCTCGGATTGTTCCCTCGTCTTCGGGTGCTTTCAGTGCTTATGAATACTATTGCAAAACCAAGCCCACCCCAAAACCTTCTCCTAAAACATTTACCTTTCACCGCAACAGTTACTCTTCCTTAGAGAACAACTTCAACAGTTGCAAGGATTCTAGGAGGTCTTTTCTCTTCTGGGAACCTTTTTGCATTGCTACATGA 1248 0.4407 MSTCTNKKIQLPKYRRIDEETLLMQKQGIVTILGSNNDSATSFRRTLSADMSSKKWLSQNGFSPMKKISSAEQISRSFTEPTVAADSSSSSEDDNSEQIKQRRCHIWEAIQKKENVEKLGELDIWSSILSKKADEESSKLTIPPYVHPLVKRSKSCLSEKSLQICTESLGSETGSDGFSSYSPSETEDSEEEKEEKEKHKMELSHGEEFHVPKQNHAVKRTSPRSFPPPLPSLHMRSHRDNGRLFIQAVSVPSQNNFSAERQNGRLVLTFAEMSEEEAEEEAEEFESRVKVQENAPMLLSSGIGLAVMMNKPSGVGDSYTSPKWSEKFNDVVNFKDVDVAQHGPLPPRPRARIVPSSSGAFSAYEYYCKTKPTPKPSPKTFTFHRNSYSSLENNFNSCKDSRRSFLFWEPFCIAT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00830 415 MobiDBLite consensus disorder prediction 168 204 - -
Vimu4g00830 415 Pfam Fantastic Four meristem regulator 225 270 IPR046431 -
Vimu4g00830 415 Coils Coil 268 295 - -
Vimu4g00830 415 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 40 415 IPR021410 -
Vimu4g00830 415 MobiDBLite consensus disorder prediction 79 99 - -
Vimu4g00830 415 MobiDBLite consensus disorder prediction 168 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00830 Vimu-Chr4 6641512 6642759 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00830 - - gmx:100790085 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00830 4 6641512 6642759 Vimu4g00830 4 6641512 6642759 ECH
Vimu4g00830 4 6641512 6642759 Vimu5g01659 5 28187397 28188728 PCT