Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01595 ATGGGAAGTGCCGTTGAGACGCTGTGCGGACAAGCCTACGGGGCGAAGAAATTCCACATGTTAGGTGTGTACCTGCAACGATCCACGGTGCTGCTCACACTCGCGGGCGTTCTGCTAACCGTAATCTACGTTTTAGCGGAACCAATCCTGCTGTTTCTCGGCGAGTCGCCGCAAATCGCGTCGGCGGCGGCGCTTTTCGTGTACGGGCTCATCCCTCAGATCTTCGCGTACGCCGTGAACTTCCCCATCCAGAAGTTTCTCCAGGCGCAGAGCATCGTGGCTCCGAGCTCGTACATTTCTTGCGCCACGCTCGTTTTCCACCTCGTGTTCAGTTGGTTGGCGGTGAATAAGCTGGGGATGGGCCTGTTTGGCGCCTCGCTGGTGCTCAGCATCTCCTGGTGGGTCAACGTGCTGGCGCAGTTCGCTTACATCGTGAAGAGCGATCGGTGCAAGGAGACTTGGCGCGGCTTCACCTTCGAAGCGTTTTCGGGGTTGCCGGAGTTTTTCAAACTGTCGGCGGCTTCCGCCGTTATGCTCTGCCTAGAGACGTGGTACTTCCAGATTCTGGTGCTGCTCGCGGGGTTGCTTCCTGAGCCTGAGTTGGCTCTCGATTCCCTTTCCGTCTGGTTAGTCTCATTCTCTCTTCATTACTCTTTCAAATTAGGTTTTAACAGTTTTTTTTTTCGCCATTACCACAATTATTTTCAATGTTTTCCATTTTTTTTTCTTTATGATTAA 738 0.5298 MGSAVETLCGQAYGAKKFHMLGVYLQRSTVLLTLAGVLLTVIYVLAEPILLFLGESPQIASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSSYISCATLVFHLVFSWLAVNKLGMGLFGASLVLSISWWVNVLAQFAYIVKSDRCKETWRGFTFEAFSGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPEPELALDSLSVWLVSFSLHYSFKLGFNSFFFRHYHNYFQCFPFFFLYD 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01595 245 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 225 - -
Vimu5g01595 245 Pfam MatE 1 113 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01595 Vimu-Chr5 27468284 27469021 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01595 K03327 - gmx:100790437 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01595 5 27468284 27469021 Vimu5g01595 5 27468284 27469021 ECH
Vimu4g00895 4 7344187 7350167 Vimu5g01595 5 27468284 27469021 PCT