Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01518 ATGCAATCATTTTCGTTCAGTCTCGCGTGCCTTACTTTTTTCACCTCGCTCCTCCTACTACAACGACACCCTTTTTCTCATGCCGGTTTACTGTCCGAACCGGTGAGTAACCCCAACCAGCCTCTCGAACCGGGCCAATACCCCTCCTCCAACACGGTTCCCGCATTCCCGGTTCAGACCCAGACGCAGACCTGCCGGCTTGACCTCTCCAACGAGCTCTTCGGCGGAGTCAAGGACGCGTGCGGCAAGGACCTCGACCGGAGCCGCTGCTGCCCCGTCCTGGCCGCGTGGCTCTTCGCCGCACACGCCCGCTCTGCCCTCGAGGTCTCCGGTGCGCCGCCGCCGGCCTCCGGCGACCTCCCCATGATGCCCGACGACTCCCAGAAGTGCGTCAACTCCCTCCAAGACTCGCTCCTCACTCGCAATATCCGAATCCCCCAACCCAACGCCACCTGCGACGCCATCCTCTGCTTCTGCGGCATCAGACTACACCAAATAACATCCTTAACTTGCAACGCAGCGTTCAACGTTTCTCTCTCCCACAAAAACGCCACCCCTACCGCCGCCGTTCGCAACTTGGAAAACAATTGTCGCAACTCCTCTTACGCCGGATGCACCAGATGCCTCGGCGCCCTACAAAAGGTGAAAGGGTACAAGAACGAGACAAAGGGTAGTGGAGGAAGCGAGAGGGTGAAGAAAATGTTCAACAGGGACTGTCAACTGATGGGATTAACGTGGCTGCTTGCAAAGAACAAAACGGCGTACATACCCACCGTATCGGCGGTGTTGCGCGCGATGATGTACAGCGCGCATCCGCATGAGTCGAAATGCAGTCCCGATCAGGAGAACATGCCGCTGGCCGTTGATTCGCTTCAGTTCGAGAGTGGAAAAGGCGCATCGCGGCCGTCAAAGTTTATGGTGACGGTTTTGCCCCTGGTGATTATGTTATTTTCATGTTTTGTGTAG 966 0.5714 MQSFSFSLACLTFFTSLLLLQRHPFSHAGLLSEPVSNPNQPLEPGQYPSSNTVPAFPVQTQTQTCRLDLSNELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARSALEVSGAPPPASGDLPMMPDDSQKCVNSLQDSLLTRNIRIPQPNATCDAILCFCGIRLHQITSLTCNAAFNVSLSHKNATPTAAVRNLENNCRNSSYAGCTRCLGALQKVKGYKNETKGSGGSERVKKMFNRDCQLMGLTWLLAKNKTAYIPTVSAVLRAMMYSAHPHESKCSPDQENMPLAVDSLQFESGKGASRPSKFMVTVLPLVIMLFSCFV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01518 321 PANTHER GPI-ANCHORED PROTEIN 5 315 IPR040376 -
Vimu5g01518 321 Pfam SPARK 60 223 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01518 Vimu-Chr5 26407147 26409992 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01518 - - vra:106777532 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01518 5 26407147 26409992 Vimu5g01518 5 26407147 26409992 ECH
Vimu4g00975 4 8208131 8209522 Vimu5g01518 5 26407147 26409992 PCT