Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00975 ATGCAATTGTTCGTCACTTCCATTGTGCGAGGCCTTGTTTTCTTGGCTTCAATATGGTTCACAGCTGCACAACCTCTGAACCCTGGAGACTCGCCGTCCTTCAACACCGTCCCCGCATACCCGACCCAAACCCGCTCCCAAATCTGCCGCCTCGACATCTCTAACGAGCTCTTCGGCGGCGTCAACCACGCCTGCGGCACCACCCTTGACCGCAGCCGCTGCTGTCCAGTCCTTGCCGCCTGGCTCTTCGCGGCCTTCGCCCGAACAGCCCTCGAAGTATCCGCCGCCGCGCCACCTCCCTCCGGCGACCTCCCCATGATGCCCGACGACTCCCAGAATTGCGTCAACTCGCTCCAAGACTCACTAAGAAATCGGAGCATCCGAATTCCACAACCCAACGGCACCTGCGACGCCATTCTCTGCTTCTGCGGCATCAGACTCCACCAGATAACCTCCCTCAGCTGCCCCAACGCGTTCAACATCAGCGATGTTCGAAACGTCTCCGGCACCCACAACGCCACCCCCACCGCCGTTGTACGGAACCTGGAAAAGAATTGCCGTAACGCTTCTTACGCTGGCTGCACGCAATGCCTCAGCGCTCTACAAAAGGTGAAAGGGAGTAAGAAGGACAGTGAGAGTGAGAGCGAGAGAGCTAAGAAGATGTTCAACCGTGACTGCCAATTAATGGCGCTGACGTGGCTGCTAGGAAGAAACAAAACGGCGTACATACCAACCGTTTCGGCGGTGTTGCGAGCTGTGATGTACAGCGCACATCCACACGAATCAAAGTGTAGTCCGGACCAGGACAACATGCCCTTGGCCGTTGATTCCCTGCAATTTGAGACGAACCGGGTTTCATCTAGGCCGTTGAGGATAGTTTGGATTATGCTCCTGATGGTTCTGCTTTTTTTGTGA 915 0.5617 MQLFVTSIVRGLVFLASIWFTAAQPLNPGDSPSFNTVPAYPTQTRSQICRLDISNELFGGVNHACGTTLDRSRCCPVLAAWLFAAFARTALEVSAAAPPPSGDLPMMPDDSQNCVNSLQDSLRNRSIRIPQPNGTCDAILCFCGIRLHQITSLSCPNAFNISDVRNVSGTHNATPTAVVRNLEKNCRNASYAGCTQCLSALQKVKGSKKDSESESERAKKMFNRDCQLMALTWLLGRNKTAYIPTVSAVLRAVMYSAHPHESKCSPDQDNMPLAVDSLQFETNRVSSRPLRIVWIMLLMVLLFL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00975 304 PANTHER GPI-ANCHORED PROTEIN 20 300 IPR040376 -
Vimu4g00975 304 Pfam SPARK 46 226 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00975 Vimu-Chr4 8208131 8209522 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00975 - - var:108334244 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00975 4 8208131 8209522 Vimu4g00975 4 8208131 8209522 ECH
Vimu4g00975 4 8208131 8209522 Vimu5g01518 5 26407147 26409992 PCT