Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01516 ATGGCTTCTTCTTCCTTCATCAGCAACTTCATAATTCCCGACCACATTCTCGTACCGGGCTCTCTCGTTGGAAATAAGGGCCACGAGCCTGAGTGTCCCGTCCTCGTTTTTGTCAACTCCAAGAGTGGCGGTCAACTCGGAGGAGATCTCCTCCAAACCTATCGCAATTTACTTAATCCAAAACAGGTTTTTGATTTGGGGGAGCAGGCGCCTGATGAGGTTCTCAGAACGGTGTATGCTAATTTGGAAAGCCTTAATCGACAGGGTGATCAGTTTGCTAAAACGATCATGAAGAAATTGAAGTTAATTGTTGCAGGGGGTGATGGAACAGCAGGCTGGCTTCTTGGAGTTGTTTGTGATCTCAAATTATCTCACCCTCCACCTATTGCCACTGTGCCACTGGGCACAGGGAATAATCTGCCTTTTGCGTTTGGTTGGGGGAAGAAGAATCCAACAACAGATCAAGGATCAGTAGAGTCATTTTTAAATCAAGTCATGAAGGCAAAGGAAATAAAAATTGACAACTGGCACATTCTCATGAGAATGAGAGCTCCTAAAGTAGGTTCCTGTGATCCAATTCCACCACTTGAGCTACCACATTCTTTGCATGCCTTCCATCGTGTATCTGAAGCAGATGAGCTTAATATGGAAGGTTGCCACACGTTTCGTGGGGGATTTTGGAATTACTTCAGTATGGGAATGGATGCTCAAGTGTCTTATGCATTTCATTCAGAACGAAAGAAGAATCCTGAAAAATTCAAAAACCAGTTGGTTAATCAATATTTCTTTGACTTTCTCACTCTTGAAAGGAAGGAAGAGATATGTACTCTTGTTCAGAAATTTTTAAAAACTGATATTCTGACTACTTATGCCAAGCTTGGATGCTCACAAGGATGGTTTCTTACTCCTCTTTTGCACCGTGCCGATAGCTTTTCTGGTGGACTAAATCCATGGGGTACACCTAACAGGAGAAAGCAGAGTGACAGAGATTTGACACCACCATTTGTTGATGATGGCCTACTAGAAATTGTTGGTTTTAGAAATGCGTGGCATGGCCTTGTTTTGTATGCTCCAAAAGGACACGGAACGCGTCTTGCTCAGGCGCACAGAATCCGTTTTGAGTTTCGGAAAGGTGCTGCAGATCATACATTCATGAGGATTGATGGGGAGCCTTGGAAGCAACCCCTTCCAGTTGATGATGATACAGTTGTGGTTGAGATTTCTCACCTTGGCCAGGTTAGCATGCTATCCACGGGTGATTGCAAGTCTAAAAGTATGTATGATCCTTTATCACCACGCCAAGATGTTGAGGAAGATGACAGTGATGAAGATGCCTCTCCATCAGAGGAATTTCGGAAGTTTGGTGCAGCAGATACATTTAAAATCCCATATGACATTGACCCTTCTCGTCTTAGTTAG 1419 0.4362 MASSSFISNFIIPDHILVPGSLVGNKGHEPECPVLVFVNSKSGGQLGGDLLQTYRNLLNPKQVFDLGEQAPDEVLRTVYANLESLNRQGDQFAKTIMKKLKLIVAGGDGTAGWLLGVVCDLKLSHPPPIATVPLGTGNNLPFAFGWGKKNPTTDQGSVESFLNQVMKAKEIKIDNWHILMRMRAPKVGSCDPIPPLELPHSLHAFHRVSEADELNMEGCHTFRGGFWNYFSMGMDAQVSYAFHSERKKNPEKFKNQLVNQYFFDFLTLERKEEICTLVQKFLKTDILTTYAKLGCSQGWFLTPLLHRADSFSGGLNPWGTPNRRKQSDRDLTPPFVDDGLLEIVGFRNAWHGLVLYAPKGHGTRLAQAHRIRFEFRKGAADHTFMRIDGEPWKQPLPVDDDTVVVEISHLGQVSMLSTGDCKSKSMYDPLSPRQDVEEDDSDEDASPSEEFRKFGAADTFKIPYDIDPSRLS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01516 472 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 29 182 IPR001206 GO:0016301
Vimu5g01516 472 SMART dagk_c4b_2 228 391 IPR000756 GO:0004143|GO:0007205
Vimu5g01516 472 Pfam Diacylglycerol kinase catalytic domain 33 158 IPR001206 GO:0016301
Vimu5g01516 472 Gene3D - 32 179 IPR017438 -
Vimu5g01516 472 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 32 398 IPR016064 -
Vimu5g01516 472 PANTHER DIACYLGLYCEROL KINASE 28 420 IPR037607 GO:0004143|GO:0007165
Vimu5g01516 472 MobiDBLite consensus disorder prediction 421 456 - -
Vimu5g01516 472 Pfam Diacylglycerol kinase accessory domain 226 391 IPR000756 GO:0004143|GO:0007205
Vimu5g01516 472 FunFam Diacylglycerol kinase 32 175 - -
Vimu5g01516 472 SMART dagk_c4a_7 33 176 IPR001206 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01516 Vimu-Chr5 26362760 26368711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01516 4 463 Acyl Lipid Metabolism Gene Families AT2G20900 64.087 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01516 K00901 - gmx:100817198 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01516 5 26362760 26368711 Vimu5g01516 5 26362760 26368711 ECH
Vimu4g00987 4 8295214 8301069 Vimu5g01516 5 26362760 26368711 PCT