Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01479 ATGATTTTCGATAAAGGGTCAATGCAATCTAAGTCTAACCTCGACTGCTTCCTCCGCTGTACGACACCTATTGTTCCGTCTCAGTTTCTTCCCAAGCACGAGATTCGAAACCTTAACCGTTTGTGGCACCCCTGGGAGAGAGAAGCGGTTGAGTACTTCACTTTGGGCGATCTCTGGAATCGGTTCGACGAATGGAGTGCTTACGGAGCTGGAGTTCCCATTTCGTTGTCCAATGAGGAGACACTTGTTCAGTACTATGTTCCTTACCTTTCCGCAATTCAAATATTCACCAGCAGCACTTTCAGGATGTTCCGGTTTGAAGTGATTTTTGTGAATTATGCTGTGGTTGGTTCTAGGCTTGATGATTGGTTGTGGGAAGAGACAGAGTCAGGTGAGTGTGAGACAAGGGATTCGTACAGCGATTCCTACAGTGAAGAGAGTGAGTGTGATAAGCTATGGAGGTGGGATGGAACTTCATCAGAGGAGGGAGGATCTGAGCATGATTGTTTGTGGCAGATGAATGATCGATTGGGTCATCTTTACTTTCAGTATTTTGAAAGATCAACTCCATATGGGAGAGTCCCTCTAATGGATAAGATCAATGGGTTAGCAGAAAGATACCCAGGGTTGATGTCACTGAGAAGTGTAGACCTTTCCCCAGCAAATATGGATGTGGATGATGATACCGGAGGAGGGAAAGAGAAGAGAAAAGAAGGTGAAGGAATTTCGCTGGCAGCGTTTGGTTTGGCCACGTATAAGATGCAAGGGAATTTGTGGGTCTCAGGGAATTGTGGTAGGGACCAAGAAAGACTGGTCTCACTGTTGAGCGTGGCAGATTCATGGTTGAAGCAACTAAGGGTCCAACATCATGACTTTAATTACTTCATGGGCATTCGGCATGGCTGA 906 0.4592 MIFDKGSMQSKSNLDCFLRCTTPIVPSQFLPKHEIRNLNRLWHPWEREAVEYFTLGDLWNRFDEWSAYGAGVPISLSNEETLVQYYVPYLSAIQIFTSSTFRMFRFEVIFVNYAVVGSRLDDWLWEETESGECETRDSYSDSYSEESECDKLWRWDGTSSEEGGSEHDCLWQMNDRLGHLYFQYFERSTPYGRVPLMDKINGLAERYPGLMSLRSVDLSPANMDVDDDTGGGKEKRKEGEGISLAAFGLATYKMQGNLWVSGNCGRDQERLVSLLSVADSWLKQLRVQHHDFNYFMGIRHG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01479 301 PANTHER T15D22.8 231 296 - -
Vimu5g01479 301 Pfam Protein of unknown function (DUF789) 12 221 IPR008507 -
Vimu5g01479 301 Pfam Protein of unknown function (DUF789) 231 295 IPR008507 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01479 Vimu-Chr5 25803515 25807315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01479 - - gmx:100799384 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01479 5 25803515 25807315 Vimu5g01479 5 25803515 25807315 ECH
Vimu4g01024 4 8653450 8655803 Vimu5g01479 5 25803515 25807315 PCT