Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01024 ATGGATCTTGACGATGATATTGAGGGTGGGCATGAGAAGAAAAAGGAAGGGGAAGGCATAGCACTGCCGGCATTCGGTTTGGCAACGTACAAGATGCAAGGAGGAAACGTGTGGGTGGCAGGAAATTGTGGTCGGGACCAAGAAAGGCTATTGTCACTGTTGAGTGTGGCAGATTCATGGTTGAAGCAACTCAGGGTCCAGCATCATGACTTTAATCACTTCATGGGCATTCGACATGCTAAAATCTTCCTTTTAAAATTTTGGTCAGAATTGAAAATGATGTTTGGGTCTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATACACATATCTTAA 375 0.3573 MDLDDDIEGGHEKKKEGEGIALPAFGLATYKMQGGNVWVAGNCGRDQERLLSLLSVADSWLKQLRVQHHDFNHFMGIRHAKIFLLKFWSELKMMFGSFIIIIIIIIIIIIIIIIIIIIIIIHIS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01024 124 PANTHER T15D22.8 13 75 - -
Vimu4g01024 124 Pfam Protein of unknown function (DUF789) 9 74 IPR008507 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01024 Vimu-Chr4 8653450 8655803 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01024 - - gmx:100815732 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01024 4 8653450 8655803 Vimu4g01024 4 8653450 8655803 ECH
Vimu4g01024 4 8653450 8655803 Vimu5g01479 5 25803515 25807315 PCT