Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01424 ATGGCCAAAGAATTCTTCACTGGTTCGGCTACTGGCCGGAGCTCCGACGAAGTGAGTTTAGCTGACATAGTTTTTGAGAGTTGGGATTCATTCGATTCCAATAAAGACGGAGATGTTGATGAAAACAACAACGAAAACGATGATTCTTCATCAGAAAAGTCTAAAGCCTTTTGGGAAGAAAAAGATCAGCTTCTTAAGGGAATTTTGTGCAGGACTAGTTCATGTGAGAAAAAGGTGAGGGAAGCAACGAAGGAGGTCGTGAGAGAAATGGATAATTCTGAGATGGTGTGTAGTTGCCGGCGGCAAGTGGTGGCTAAGAGTTGCCGGAACTGCATGCTGAAAGAGCTATGTGATCGATTGTTGAACCTTGGCTACAACTGTGCCATTTGCAAGTCTAAATGGAGGAGTTCATCAGAAATCATATCAGGGGAGCACTCATATTTGGAAGTGAGAGAGGATTTATCAAAGAGAAAAAGTGAAGTAAAAGTGGTGATTGAAATGAGCTTTAGAGGGGAATTCGAGATGGCATGTGGGAATGAAGAATACAAGGAATTGATAAAGCGATTGCCAGAAGTGTTTGTAGGGAAAGCAGAGAGGTTAAGAGCATTGGTGAAGATTATGTGCTCAGCTGCTAAAAGGTGCATGAAGGAGAAGAAGATGCACATTGGACCATGGAGGAAACACAAGTACATGGAAGCTAAGTGGTTTGGCACGTGCGAAAGGTCAACAATGGAACCACTGCTGCTAATGAACTCTGCTACTCGCCAACCAAAATATAAGGCTTCGATGCTCACTTTTGATCTATTATTGGATAACATTCAAGGCTTGCACTGTACTACAGTTGAAGTAGTGTGA 855 0.4269 MAKEFFTGSATGRSSDEVSLADIVFESWDSFDSNKDGDVDENNNENDDSSSEKSKAFWEEKDQLLKGILCRTSSCEKKVREATKEVVREMDNSEMVCSCRRQVVAKSCRNCMLKELCDRLLNLGYNCAICKSKWRSSSEIISGEHSYLEVREDLSKRKSEVKVVIEMSFRGEFEMACGNEEYKELIKRLPEVFVGKAERLRALVKIMCSAAKRCMKEKKMHIGPWRKHKYMEAKWFGTCERSTMEPLLLMNSATRQPKYKASMLTFDLLLDNIQGLHCTTVEVV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01424 284 NCBIfam uncharacterized plant-specific domain TIGR01615 115 242 IPR006502 -
Vimu5g01424 284 PANTHER OS03G0796600 PROTEIN 14 248 IPR006502 -
Vimu5g01424 284 MobiDBLite consensus disorder prediction 30 55 - -
Vimu5g01424 284 Pfam PDDEXK-like family of unknown function 37 241 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01424 Vimu-Chr5 24991857 24993219 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01424 - - gmx:100815222 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01424 5 24991857 24993219 Vimu5g01424 5 24991857 24993219 ECH
Vimu4g01065 4 8989552 8997606 Vimu5g01424 5 24991857 24993219 PCT