Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01286 ATGCCTCGCAGAGATCCCAGCAAGAAGGTGAAAGAGAGAGATGATCGCGTTGAGGCAGATGGAAAGGAGTCGTTTGGTGAGAAAGAGAGAGAGTTGGTTTCTGATAGAGCTAGGTCTGGGAATATAGTTAAAGACAAAGAGGTTGAAGAAGGAAGAGAAAAAGATAAACTCGAGGGAAGAACAAGATTGGTGGAGGGAAAAGTGTGGAACGAAGAGGAGAAACGAAGAAAGAATCCTCTAAGAGGAAAAGTTGATGGTGAGGAACATGGAAAAGGAAGAGGAAGAGAACAAAATGAACAGCCTAGTCTTGAAGACATTTCCAAGTACAGAGCCGAAGCTCAAGAAAAGGCAATGAATGCAGTTGAAGCTGCTAAGGAAAAATATGAAAAAAAGAGAGAAAAACAAGCAGAAATAGAAGCTTCTAAAGAGAGAAACAAGCAGGCAAATGAAGAGGGAACACAGGAAAAAGACTTCACAAGAGAGAAGGGTCGTCAAGAAGGAAATCTTGAAGGAGATACAGTGGACAAAACTGGTGGAGGCATCAATGGTGAGAATGTTGGAGAAGAAGCAGTGGAAATTGGAAAGATTGCTTCTTCTAAAATGGCTGCAGATTTGAGGGAGAGGGCTATAGTCACAGGTTGGAGTGCTGCTCAGTACTCTACTGAGATGACTGTGGAGGTAGCCAAGGCTGCAACTACCATTGTTGAGGAAGCAGTTGAGTATTTGGGCCAGAAGGCTTATGAGCTTGCTGCTAAGTCAGTAGATACTGCTACTGGTTTAGCTGCTGCAACTGGTGAGAATGCAAAGGAGTACACTGCAAGGAAGAAAAAGGAGGCAGAGAGAGCTTTGGAGGCCAAAAGGGAAACTCAGAATCAGGCAAATGAAACTGTGGCTGAGATTGGAGAGAACATGGTGAAACCAGAACATCAAAGTGAAGGGGGAGGGGTGTTGAATTCCATAGGTGAAACCATTGCAGAAATAGCAGAAACTACTAGAATAATGGTATCAGGAGAGGGAGAAAAGGAAAAACCACAATCACCTCAATATGAACATGCAGACATGAAACTTGATTAG 1074 0.433 MPRRDPSKKVKERDDRVEADGKESFGEKERELVSDRARSGNIVKDKEVEEGREKDKLEGRTRLVEGKVWNEEEKRRKNPLRGKVDGEEHGKGRGREQNEQPSLEDISKYRAEAQEKAMNAVEAAKEKYEKKREKQAEIEASKERNKQANEEGTQEKDFTREKGRQEGNLEGDTVDKTGGGINGENVGEEAVEIGKIASSKMAADLRERAIVTGWSAAQYSTEMTVEVAKAATTIVEEAVEYLGQKAYELAAKSVDTATGLAAATGENAKEYTARKKKEAERALEAKRETQNQANETVAEIGENMVKPEHQSEGGGVLNSIGETIAEIAETTRIMVSGEGEKEKPQSPQYEHADMKLD 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01286 357 MobiDBLite consensus disorder prediction 272 293 - -
Vimu5g01286 357 Coils Coil 268 299 - -
Vimu5g01286 357 MobiDBLite consensus disorder prediction 272 288 - -
Vimu5g01286 357 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 198 350 - -
Vimu5g01286 357 MobiDBLite consensus disorder prediction 334 357 - -
Vimu5g01286 357 Coils Coil 111 151 - -
Vimu5g01286 357 MobiDBLite consensus disorder prediction 1 187 - -
Vimu5g01286 357 MobiDBLite consensus disorder prediction 1 112 - -
Vimu5g01286 357 MobiDBLite consensus disorder prediction 335 357 - -
Vimu5g01286 357 MobiDBLite consensus disorder prediction 119 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01286 Vimu-Chr5 22838283 22839928 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01286 - - vum:124840809 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01145 4 10030825 10032693 Vimu5g01286 5 22838283 22839928 PCT