LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu4g01145	ATGGCGTCTCAACAGTTGGCTCGAAGAGAAAACACCACCACCGAGAGACGGGTTCACCTTGACAAAGACACAGTTCCCAATATGGCTACCCACTTTGAGAAACTTGCAGGGAAAGCTAATGAATCAGATATCAACCAAAATAGGGAAGAGCCACCACAAGCGTTACAAGGTGGAAATCAGGTCAAAGAGCGTGCAGGGAAAGCCATTGGGGATGTTGGTGGACGTCAGAAAGTGAAGGGTGAGGATCCCAAAAGAGGGAATAAGGACAGAGAAGAACTGGAAAGACGAACCAGGGAGGTTAAAGGAAGAACGCAAAGAAGAAGAGAAAATGAAGGACAAGTAGTGGCAGAGAAAGGAAGAAGAGTAAAACTTGGTGCTAGTGCAACCGCAGCTAATGCTAGTACTTTGGAAAAAGGTGATAGTAATACTCGGAGACCAAGAGAAGAGAGTGAAAGTGAAAAATCTACGTTGGAACAGGTTTCCAACAGCAGAGATCACGATTCGATAGACTTGAAGAAGAGGTACGAGACAGCGAAGCAAGCAGCGAGCGAGACACTGAAAAGTGCAGCTCAAATCGCAACACAAGCGAAGGACGCAACGGTTGAGAAGGGTCAACAAGGCTGTGCTGCAACCAAAGACACCATTGCAAGTGCCGCAAATACCGTTTCGGAAAAAACTGCGCCGATGGCAGAGAAGGCCAAAGGGTATACATTTCAAGTGGCGGAGAAGGCCAAGAGTGCAGGAGGCACGACAGCGAGATACGTCGGAGAGAAAGCGATTCAAGCAAAAGATGTTGCCGTGGAAGGTGGGAAGAGTGCGGCGGGGTATGCTGCGAAGGTGGCTGCGGATTTGAAGGACAGGGCGCCGGTGGTGGGGTGGGCCGCGGCACATTTTTCGACGGAGATGACGGTGGAGGGAACGAAGGTCGCGGCCCATGTGGTTGAGGGGGCGGCAGGGTATGCGGGGCAAAAGGCAGCTGAAATTGCTTCAAAGTCAGTAGGTGCTGTTAAAGATTTGGCTGCTTCAGCTGGTGAGTCTGCTAAGGGATACACTGCAAGGAAGAAAGAAGAGGCACAGAAGGAATTGGAGGCCAAAAGAGCATCTCAGTTAGCAGAAGAGAGGCAATCGGAAGGAATGGGCGAAACTGTAATCCAGAATGCAGAAAAGCCGAAGGAAGGTGGAGGAAGGTCTCAGCAGGAGGGAACTGGAAGCGATGTGCTGACAGAAATAAGCGAAACAGTGAGCAATGTTGGGGCGAAGGTGAAGAAACCATTTGATGGAGGGACCAAAGAAGAAAGCGGAAGTGAGACAAGTGGAGGGCAAGAAGAAGGAAAGGATGTGAGTGGTCAAACATTGAAAAGCACTGATGAGAAGTTGGATGTTGCCGAACAGAGAGGAGCTGTTAGAACACTTCTCTGGTAA	1422	0.4979	MASQQLARRENTTTERRVHLDKDTVPNMATHFEKLAGKANESDINQNREEPPQALQGGNQVKERAGKAIGDVGGRQKVKGEDPKRGNKDREELERRTREVKGRTQRRRENEGQVVAEKGRRVKLGASATAANASTLEKGDSNTRRPREESESEKSTLEQVSNSRDHDSIDLKKRYETAKQAASETLKSAAQIATQAKDATVEKGQQGCAATKDTIASAANTVSEKTAPMAEKAKGYTFQVAEKAKSAGGTTARYVGEKAIQAKDVAVEGGKSAAGYAAKVAADLKDRAPVVGWAAAHFSTEMTVEGTKVAAHVVEGAAGYAGQKAAEIASKSVGAVKDLAASAGESAKGYTARKKEEAQKELEAKRASQLAEERQSEGMGETVIQNAEKPKEGGGRSQQEGTGSDVLTEISETVSNVGAKVKKPFDGGTKEESGSETSGGQEEGKDVSGQTLKSTDEKLDVAEQRGAVRTLLW	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu4g01145	473	MobiDBLite	consensus disorder prediction	140	170	-	-
	Vimu4g01145	473	MobiDBLite	consensus disorder prediction	1	170	-	-
	Vimu4g01145	473	MobiDBLite	consensus disorder prediction	449	464	-	-
	Vimu4g01145	473	MobiDBLite	consensus disorder prediction	68	118	-	-
	Vimu4g01145	473	Coils	Coil	352	375	-	-
	Vimu4g01145	473	PANTHER	LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN	1	435	-	-
	Vimu4g01145	473	MobiDBLite	consensus disorder prediction	345	473	-	-
	Vimu4g01145	473	MobiDBLite	consensus disorder prediction	10	28	-	-
	Vimu4g01145	473	MobiDBLite	consensus disorder prediction	397	415	-	-
	Vimu4g01145	473	MobiDBLite	consensus disorder prediction	40	54	-	-
	Vimu4g01145	473	MobiDBLite	consensus disorder prediction	349	372	-	-
	Vimu4g01145	473	MobiDBLite	consensus disorder prediction	431	448	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu4g01145	-		-	vra:106778499	702.975

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu4g01145	4	10030825	10032693	Vimu5g01286	5	22838283	22839928	PCT